RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 SNX3O60493 162 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 SPAG7O75391 227 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 AP2A2O94973 939 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 SLC25A14O95258 325 aaPredicted RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 LMNAP02545 664 aaKnown RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 MPOP05164 745 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 GSTA1P08263 222 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 ATP1B2P14415 290 aaPredicted RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 STMN1P16949 149 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 ZNF37AP17032 561 aaPredicted RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 HNRNPA2B1P22626 353 aaKnown RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 ETV4P43268 484 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 CLCN7P51798 805 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 CTSCP53634 463 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 PFN3P60673 137 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 IRF9Q00978 393 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 TMEM115Q12893 351 aaPredicted RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 DLG1Q12959 904 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 IFT88Q13099 833 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 SGCGQ13326 291 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 GBX1Q14549 363 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 ANGPT1Q15389 498 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 LACTB2Q53H82 288 aaPredicted RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 XKR5Q6UX68 686 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 GCNT7Q6ZNI0 430 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 ABCA7Q8IZY2 2146 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 TMEM145Q8NBT3 493 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 CD200R1Q8TD46 325 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 HEXDCQ8WVB3 486 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 ANKRD49Q8WVL7 239 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 BIRC7Q96CA5 298 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 HIC2Q96JB3 615 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 BMFQ96LC9 184 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 GPR78Q96P69 363 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 GPR21Q99679 349 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 GPR174Q9BXC1 333 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 C1QTNF7Q9BXJ2 289 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 FAM126AQ9BYI3 521 aaPredicted RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 IQCGQ9H095 443 aaKnown RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 PCED1AQ9H1Q7 454 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 TRIM39Q9HCM9 518 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 GNPTGQ9UJJ9 305 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 PCYT1BQ9Y5K3 369 aaPredicted RBP11.16□□□□□ -0.62
SND1-212ENST00000485871 CACNA1GO43497 2377 aa11.16□□□□□ -0.62
SND1-212ENST00000485871 POM121BA6NF01 834 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 CCT8L1PA6NM43 557 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 H3BMM5 538 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 CHUKO15111 745 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 RHOBTB1O94844 696 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 TSPAN12O95859 305 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 HOXC4P09017 264 aaPredicted RBP11.15□□□□□ -0.62
SND1-212ENST00000485871 COL6A2P12110 1019 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 TAC1P20366 129 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 SAT1P21673 171 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 BCKDHBP21953 392 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 CRABP2P29373 138 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 AKT1P31749 480 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 CRHR1P34998 444 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 SLC26A3P40879 764 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 PRLHRP49683 370 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 INPP5AQ14642 412 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 BCL7AQ4VC05 210 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 PTRHD1Q6GMV3 140 aaKnown RBP11.15□□□□□ -0.62
SND1-212ENST00000485871 SPATA21Q7Z572 469 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 TMEM151AQ8N4L1 468 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 GDAP1Q8TB36 358 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 RAB3IL1Q8TBN0 382 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 TCP10LQ8TDR4 215 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 KCTD4Q8WVF5 259 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 TSPAN17Q96FV3 270 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 ELAC2Q9BQ52 826 aaKnown RBP11.15□□□□□ -0.62
SND1-212ENST00000485871 PITPNM3Q9BZ71 974 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 C12orf65Q9H3J6 166 aaKnown RBP11.15□□□□□ -0.62
SND1-212ENST00000485871 GPR27Q9NS67 375 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 IGSF5Q9NSI5 407 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 ZNF358Q9NW07 568 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 SPATA6Q9NWH7 488 aaPredicted RBP11.15□□□□□ -0.62
SND1-212ENST00000485871 TAS2R13Q9NYV9 303 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 TMEM216Q9P0N5 145 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 SLC17A7Q9P2U7 560 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 ATXN10Q9UBB4 475 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 GULP1Q9UBP9 304 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 EMCNQ9ULC0 261 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 DMTF1Q9Y222 760 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 ANKRD6Q9Y2G4 727 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 ARL2BPQ9Y2Y0 163 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.15□□□□□ -0.62
SND1-212ENST00000485871 DHRS7Q9Y394 339 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 VPS13AQ96RL7 3174 aa11.15□□□□□ -0.62
SND1-212ENST00000485871 FANCMQ8IYD8 2048 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 EP300Q09472 2414 aaPredicted RBP11.14□□□□□ -0.63
SND1-212ENST00000485871 A0A087X1B8 175 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 METTL12A8MUP2 240 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 COPEO14579 308 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 VEGFDO43915 354 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 DNAJC6O75061 913 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 GLRA3O75311 464 aa11.14□□□□□ -0.63
SND1-212ENST00000485871 VPS26AO75436 327 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms