RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 ATP13A5Q4VNC0 1218 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 SPOCD1Q6ZMY3 1216 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 PID1Q7Z2X4 250 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 TIPARPQ7Z3E1 657 aaKnown RBP10.4□□□□□ -0.74
HMGN1-215ENST00000485550 LRRTM4Q86VH4 590 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 VSIG1Q86XK7 387 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 TRIM48Q8IWZ4 208 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 TFB1MQ8WVM0 346 aaKnown RBP10.4□□□□□ -0.74
HMGN1-215ENST00000485550 TGM7Q96PF1 710 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 C10orf88Q9H8K7 445 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 UGT1A7Q9HAW7 530 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 UGT1A10Q9HAW8 530 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 UGT1A8Q9HAW9 530 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 RAD18Q9NS91 495 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 ZNF624Q9P2J8 865 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-215ENST00000485550 FAM153AQ9UHL3 310 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 ALG6Q9Y672 507 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 SLC30A1Q9Y6M5 507 aa10.4□□□□□ -0.74
HMGN1-215ENST00000485550 OR52A4PA6NMU1 304 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 TTLL8A6PVC2 850 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 MKRN2OSH3BPM6 223 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 POLR1CO15160 346 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 KMOO15229 486 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 GPR39O43194 453 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 KRT38O76015 456 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 UBXN7O94888 489 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 BRAFP15056 766 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 XRCC1P18887 633 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 MAP4P27816 1152 aaKnown RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 CA5AP35218 305 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 LEPRP48357 1165 aaKnown RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 NR2C2P49116 596 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 CLCNKAP51800 687 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 EPHA4P54764 986 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 DCDC1P59894 354 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 TMEM115Q12893 351 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 TFDP2Q14188 446 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 PTPRCAPQ14761 206 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 SKOR2Q2VWA4 1001 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 TCTN3Q6NUS6 607 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 KDELC1Q6UW63 502 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 CEACAM20Q6UY09 585 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 TMEM26Q6ZUK4 368 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 ASB18Q6ZVZ8 466 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 BZW1Q7L1Q6 419 aaKnown RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 PLXDC1Q8IUK5 500 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 TRAPPC5Q8IUR0 188 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 CNGA4Q8IV77 575 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 CCDC50Q8IVM0 306 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 ZNF547Q8IVP9 402 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 IPMKQ8NFU5 416 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 CPT1CQ8TCG5 803 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 BLOC1S5Q8TDH9 187 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 P3H4Q92791 437 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 ELMO2Q96JJ3 720 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 TTC25Q96NG3 672 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 ANP32EQ9BTT0 268 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 EFHD1Q9BUP0 239 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 HEMGNQ9BXL5 484 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 SPRY4Q9C004 299 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 FBXO8Q9NRD0 319 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 OGFRQ9NZT2 677 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 KLHL8Q9P2G9 620 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-215ENST00000485550 KCNMB2Q9Y691 235 aa10.39□□□□□ -0.75
HMGN1-215ENST00000485550 LOC285095A0A1B0GVY8 99 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 LILRA5A6NI73 299 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 KIF1CO43896 1103 aaKnown RBP10.38□□□□□ -0.75
HMGN1-215ENST00000485550 VEGFDO43915 354 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 RASSF9O75901 435 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 STK17BO94768 372 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 ZRANB2O95218 330 aaKnown RBP eCLIP10.38□□□□□ -0.756e-7■■□□□ 12.1
HMGN1-215ENST00000485550 POU3F2P20265 443 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-215ENST00000485550 IDSP22304 550 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 DCTP40126 519 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 TNNT3P45378 269 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-215ENST00000485550 MARCKSL1P49006 195 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 SH3BP2P78314 561 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 MC1RQ01726 317 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 TBX2Q13207 712 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-215ENST00000485550 GTF2H3Q13889 308 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 CHRNA6Q15825 494 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 PPP2R5EQ16537 467 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 SIRPB2Q5JXA9 342 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 PDPK2PQ6A1A2 396 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 FAM151BQ6UXP7 276 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 ZNF567Q8N184 647 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 TTC30BQ8N4P2 665 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 GALNT11Q8NCW6 608 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 NAT14Q8WUY8 206 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 RSC1A1Q92681 617 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 CXorf40BQ96DE9 158 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 OXNAD1Q96HP4 312 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-215ENST00000485550 MRGPRX2Q96LB1 330 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 C9orf72Q96LT7 481 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 TEFMQ96QE5 360 aaKnown RBP10.38□□□□□ -0.75
HMGN1-215ENST00000485550 TIMM29Q9BSF4 260 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 IL26Q9NPH9 171 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 NFKBIL1Q9UBC1 381 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-215ENST00000485550 INTUQ9ULD6 942 aa10.38□□□□□ -0.75
HMGN1-215ENST00000485550 PSMD13Q9UNM6 376 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms