RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 KCNMB2Q9Y691 235 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 TIAF1O95411 115 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 EPOP01588 193 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 TPM1P09493 284 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 NELFEP18615 380 aaKnown RBP18.85■□□□□ 0.61
COL27A1-205ENST00000485397 NR1D1P20393 614 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 SEPT6Q14141 434 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 TCEAL1Q15170 157 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 RPE65Q16518 533 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 PPP2R5EQ16537 467 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 TMEM220Q6QAJ8 160 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 PID1Q7Z2X4 250 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 TMEM135Q86UB9 458 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 PPP1R3BQ86XI6 285 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 ZNF567Q8N184 647 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 IPMKQ8NFU5 416 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 DTX3LQ8TDB6 740 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 HAUS1Q96CS2 278 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 FCRL5Q96RD9 977 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 RAB33BQ9H082 229 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 GOLPH3Q9H4A6 298 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 KCTD3Q9Y597 815 aa18.85■□□□□ 0.61
COL27A1-205ENST00000485397 ZNF106Q9H2Y7 1883 aaKnown RBP18.85■□□□□ 0.61
COL27A1-205ENST00000485397 IGHV5-51A0A0C4DH38 117 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 GLYATL1P3A0A0U1RQE8 302 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 GOLGA6L3A6NEY3 463 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 OR2AG2A6NM03 316 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 K7EM74 188 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 GAPDHSO14556 408 aaPredicted RBP18.84■□□□□ 0.61
COL27A1-205ENST00000485397 KCNJ13O60928 360 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 FECHP22830 423 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 FOXK1P85037 733 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 DMPKQ09013 629 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 NFE2L1Q14494 772 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 KCNAB1Q14722 419 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 PTPRCAPQ14761 206 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 SLC1A5Q15758 541 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL27A1-205ENST00000485397 LACTB2Q53H82 288 aaPredicted RBP18.84■□□□□ 0.61
COL27A1-205ENST00000485397 LDLRAP1Q5SW96 308 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 GPRC6AQ5T6X5 926 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 ZDHHC20Q5W0Z9 365 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 GLT6D1Q7Z4J2 308 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 DDHD1Q8NEL9 900 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 HACD3Q9P035 362 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 SEMA5BQ9P283 1151 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 INTUQ9ULD6 942 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 TP53TG5Q9Y2B4 290 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 ALG6Q9Y672 507 aa18.84■□□□□ 0.61
COL27A1-205ENST00000485397 CDC14CA4D256 554 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 PSTPIP1O43586 416 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 CCNYL3P0C7X3 344 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 FOLR1P15328 257 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 PBLDP30039 288 aaPredicted RBP18.83■□□□□ 0.6
COL27A1-205ENST00000485397 TNNT3P45378 269 aaPredicted RBP18.83■□□□□ 0.6
COL27A1-205ENST00000485397 DNASE1L3Q13609 305 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 CERS6Q6ZMG9 384 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 BEND7Q8N7W2 519 aaPredicted RBP18.83■□□□□ 0.6
COL27A1-205ENST00000485397 NAT14Q8WUY8 206 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 P3H4Q92791 437 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 SLC41A2Q96JW4 573 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 MAP3K3Q99759 626 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 ANP32EQ9BTT0 268 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 ZCCHC2Q9C0B9 1178 aaKnown RBP18.83■□□□□ 0.6
COL27A1-205ENST00000485397 LHX9Q9NQ69 397 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 KCND3Q9UK17 655 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 PADI1Q9ULC6 663 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 POLHQ9Y253 713 aa18.83■□□□□ 0.6
COL27A1-205ENST00000485397 hCG_1818297A0A087WSY0 165 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 MTSS1O43312 755 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 HLA-DPA1P20036 260 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 MARCKSL1P49006 195 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 SRSF1Q07955 248 aaKnown RBP eCLIP18.82■□□□□ 0.61e-7■□□□□ 11.3
COL27A1-205ENST00000485397 MPP3Q13368 585 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 TUBB3Q13509 450 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 TFDP3Q5H9I0 405 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 PWWP2BQ6NUJ5 590 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 SIDT2Q8NBJ9 832 aaKnown RBP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 CT55Q8WUE5 264 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 UBXN4Q92575 508 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 QKIQ96PU8 341 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 RUFY1Q96T51 708 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 C10orf88Q9H8K7 445 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 AKIRIN1Q9H9L7 192 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 PDE7BQ9NP56 450 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 IMP3Q9NV31 184 aaKnown RBP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 RARRES3Q9UL19 164 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 PKP3Q9Y446 797 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 CFAP20Q9Y6A4 193 aaKnown RBP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 DNMT3AQ9Y6K1 912 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 UBR5O95071 2799 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-205ENST00000485397 NBASA2RRP1 2371 aa18.82■□□□□ 0.6
COL27A1-205ENST00000485397 PIPSLA2A3N6 862 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 CREG1O75629 220 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 AGTP01019 485 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 EBLN1P0CF75 366 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 ITGA9Q13797 1035 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 PLCL1Q15111 1095 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 FNBP1LQ5T0N5 605 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms