RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 ZNF185O15231 689 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 KRT86O43790 486 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 HLA-DQB2P05538 268 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 CAPN1P07384 714 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 VCLP18206 1134 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 HALP42357 657 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 ARSEP51690 589 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 DRG2P55039 364 aaKnown RBP12.16□□□□□ -0.46
PABPC4-215ENST00000484555 RRADP55042 308 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 ITGA1P56199 1179 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
PABPC4-215ENST00000484555 DMPKQ09013 629 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 PLEKHN1Q494U1 663 aaPredicted RBP12.16□□□□□ -0.46
PABPC4-215ENST00000484555 CRB2Q5IJ48 1285 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 CCDC122Q5T0U0 273 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 CERS6Q6ZMG9 384 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 APTXQ7Z2E3 356 aaKnown RBP12.16□□□□□ -0.46
PABPC4-215ENST00000484555 ZNF571Q7Z3V5 609 aaPredicted RBP12.16□□□□□ -0.46
PABPC4-215ENST00000484555 TMEM126BQ8IUX1 230 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 IQCKQ8N0W5 287 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 ZNF653Q96CK0 615 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 ISCUQ9H1K1 167 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 MAP10Q9P2G4 905 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 TTLL3Q9Y4R7 772 aa12.16□□□□□ -0.46
PABPC4-215ENST00000484555 CSMD1Q96PZ7 3565 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 OR5K3A6NET4 321 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 DDX3XO00571 662 aaKnown RBP eCLIP12.15□□□□□ -0.46
PABPC4-215ENST00000484555 ZBTB11O95625 1053 aaPredicted RBP12.15□□□□□ -0.46
PABPC4-215ENST00000484555 CD48P09326 243 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 RORAP35398 523 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 PRKCIP41743 596 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 ARL4DP49703 201 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 TMEM115Q12893 351 aaPredicted RBP12.15□□□□□ -0.46
PABPC4-215ENST00000484555 MMRN1Q13201 1228 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 RPE65Q16518 533 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 KHDC1Q4VXA5 237 aaKnown RBP12.15□□□□□ -0.46
PABPC4-215ENST00000484555 CCDC183Q5T5S1 534 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 ALS2CLQ60I27 953 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 LCN10Q6JVE6 187 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 IGFL3Q6UXB1 125 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 SRRM1Q8IYB3 904 aaKnown RBP12.15□□□□□ -0.46
PABPC4-215ENST00000484555 ZBTB2Q8N680 514 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 ENDOVQ8N8Q3 282 aaKnown RBP12.15□□□□□ -0.46
PABPC4-215ENST00000484555 GPR150Q8NGU9 434 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 BRSK1Q8TDC3 778 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 TRIB3Q96RU7 358 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 RANBP9Q96S59 729 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 AIPL1Q9NZN9 384 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 MYO1AQ9UBC5 1043 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 TMPRSS11EQ9UL52 423 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 SNX7Q9UNH6 387 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 BTRCQ9Y297 605 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 B3GNT3Q9Y2A9 372 aa12.15□□□□□ -0.46
PABPC4-215ENST00000484555 FBN2P35556 2912 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 ANKRD17O75179 2603 aaKnown RBP12.14□□□□□ -0.47
PABPC4-215ENST00000484555 UBA6A0AVT1 1052 aaPredicted RBP12.14□□□□□ -0.47
PABPC4-215ENST00000484555 ANKUB1A6NFN9 424 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 MTX2O75431 263 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 BPIP17213 487 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 CD86P42081 329 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 GALNT3Q14435 633 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 KRT81Q14533 505 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 GPR19Q15760 415 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
PABPC4-215ENST00000484555 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 VWA5B1Q5TIE3 1220 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
PABPC4-215ENST00000484555 CNTD1Q8N815 330 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 DTX3LQ8TDB6 740 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 ZFPM2Q8WW38 1151 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 CPT1BQ92523 772 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 HDAC11Q96DB2 347 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 SRPK1Q96SB4 655 aaKnown RBP12.14□□□□□ -0.47
PABPC4-215ENST00000484555 SYTL2Q9HCH5 934 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 LMBRD1Q9NUN5 540 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 HRASLS2Q9NWW9 162 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 TRIM10Q9UDY6 481 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 IP6K2Q9UHH9 426 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 SHOC2Q9UQ13 582 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 DNMT3AQ9Y6K1 912 aaPredicted RBP12.14□□□□□ -0.47
PABPC4-215ENST00000484555 OTOGQ6ZRI0 2925 aa12.14□□□□□ -0.47
PABPC4-215ENST00000484555 PCSK5Q92824 1860 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 A6NL46 340 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 LRRC53A6NM62 1247 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 HNRNPRO43390 633 aaKnown RBP12.13□□□□□ -0.47
PABPC4-215ENST00000484555 KLHL41O60662 606 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 MSL3P1P0C860 447 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 MX2P20592 715 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 DPYSL3Q14195 570 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 AMZ2Q86W34 360 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 TRAPPC5Q8IUR0 188 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 TADA1Q96BN2 335 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 SGSM3Q96HU1 749 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 ZNF670Q9BS34 389 aa12.13□□□□□ -0.47
PABPC4-215ENST00000484555 GPR63Q9BZJ6 419 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms