RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 APOBEC3BQ9UH17 382 aaKnown RBP6.33□□□□□ -1.4
NCL-209ENST00000484328 GNPTGQ9UJJ9 305 aa6.33□□□□□ -1.4
NCL-209ENST00000484328 GMEB2Q9UKD1 530 aa6.33□□□□□ -1.4
NCL-209ENST00000484328 CDYLQ9Y232 598 aa6.33□□□□□ -1.4
NCL-209ENST00000484328 CRYL1Q9Y2S2 319 aa6.33□□□□□ -1.4
NCL-209ENST00000484328 DNMT3AQ9Y6K1 912 aaPredicted RBP6.33□□□□□ -1.4
NCL-209ENST00000484328 C17orf113A0A1B0GUU1 675 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 EXOC1LA0A1B0GW35 172 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FAM95CA0A1B0GW59 222 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 UBA6A0AVT1 1052 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 SLC5A10A0PJK1 596 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 F8W8V4 182 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 H3BM21 787 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 KHNYNO15037 678 aaKnown RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 KMOO15229 486 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 PCDHGA12O60330 932 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FOXD2O60548 495 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 KCNJ13O60928 360 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 NIPSNAP2O75323 286 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 PIAS2O75928 621 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 WISP3O95389 354 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 ASMTLO95671 621 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CER1O95813 267 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 SHBGP04278 402 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 SYPP08247 313 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 OR56A5P0C7T3 313 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 ZNF883P0CG24 379 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 GIMD1P0DJR0 217 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FDXRP22570 491 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CNTFP26441 200 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 ATP5DP30049 168 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CCR7P32248 378 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 MAGEA12P43365 314 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 GNPDA1P46926 289 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 ARRB1P49407 418 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 CLCN7P51798 805 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 HNRNPKP61978 463 aaKnown RBP eCLIP6.32□□□□□ -1.4
NCL-209ENST00000484328 IRX4P78413 519 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 HLA-BQ31612 363 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 RBM20Q5T481 1227 aaKnown RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 GRTP1Q5TC63 336 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FAM45BPQ6NSW5 357 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FBXO38Q6PIJ6 1188 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 ADGRD1Q6QNK2 874 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CRTC3Q6UUV7 619 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 DET1Q7L5Y6 550 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 NRROSQ86YC3 692 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 TRAPPC5Q8IUR0 188 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 IQCKQ8N0W5 287 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FSTL5Q8N475 847 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 BEND7Q8N7W2 519 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 ZNF548Q8NEK5 533 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 ACVR1CQ8NER5 493 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 OR2L2Q8NH16 312 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FAM45AQ8TCE6 357 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 HM13Q8TCT9 377 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CD200R1Q8TD46 325 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 MZB1Q8WU39 189 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 NAT14Q8WUY8 206 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 UBLCP1Q8WVY7 318 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 GLMNQ92990 594 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 PANX3Q96QZ0 392 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 OLFM1Q99784 485 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 AARSD1Q9BTE6 412 aaKnown RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 TMEM109Q9BVC6 243 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 NUSAP1Q9BXS6 441 aaKnown RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 TCEAL2Q9H3H9 227 aaPredicted RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CAAP1Q9H8G2 361 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 POPDC3Q9HBV1 291 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 FSCN3Q9NQT6 498 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 TM7SF3Q9NS93 570 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 DNAAF2Q9NVR5 837 aaKnown RBP6.32□□□□□ -1.4
NCL-209ENST00000484328 DNAJC28Q9NX36 388 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 KLHL42Q9P2K6 505 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 SLC23A2Q9UGH3 650 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 SLC24A2Q9UI40 661 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 PCOLCE2Q9UKZ9 415 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 PRKAB1Q9Y478 270 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 NFS1Q9Y697 457 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 CSNK1G3Q9Y6M4 447 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 GVINP1Q7Z2Y8 2422 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 LAMA1P25391 3075 aa6.32□□□□□ -1.4
NCL-209ENST00000484328 COL27A1Q8IZC6 1860 aaPredicted RBP6.31□□□□□ -1.4
NCL-209ENST00000484328 UQCRHLA0A096LP55 91 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 MGAT4DA6NG13 374 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 IQCF5A8MTL0 148 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 LMO7DNF2Z398 122 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 EIF3FO00303 357 aaPredicted RBP6.31□□□□□ -1.4
NCL-209ENST00000484328 LIN7AO14910 233 aaPredicted RBP6.31□□□□□ -1.4
NCL-209ENST00000484328 AQP9O43315 295 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 GPC4O75487 556 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 FAM155BO75949 473 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 SLCO2B1O94956 709 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 TNFP01375 233 aa6.31□□□□□ -1.4
NCL-209ENST00000484328 ALDOAP04075 364 aaKnown RBP6.31□□□□□ -1.4
NCL-209ENST00000484328 UQCRHP07919 91 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms