RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 TMEM71Q6P5X7 295 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 IGF2-ASQ6U949 168 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 FAM83HQ6ZRV2 1179 aaPredicted RBP12.34□□□□□ -0.43
COMMD2-205ENST00000483708 SERPINA9Q86WD7 417 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 OR4D9Q8NGE8 314 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 OR2L2Q8NH16 312 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 SNIP1Q8TAD8 396 aaKnown RBP12.34□□□□□ -0.43
COMMD2-205ENST00000483708 NAT14Q8WUY8 206 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 NCSTNQ92542 709 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 CXorf40BQ96DE9 158 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 RANBP9Q96S59 729 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 TBC1D10AQ9BXI6 508 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 AP1M1Q9BXS5 423 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 ASCL3Q9NQ33 180 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 ZDHHC3Q9NYG2 299 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 WDR37Q9Y2I8 494 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 LOXL2Q9Y4K0 774 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 PLXNB3Q9ULL4 1909 aa12.34□□□□□ -0.43
COMMD2-205ENST00000483708 MAP1BP46821 2468 aaKnown RBP12.34□□□□□ -0.43
COMMD2-205ENST00000483708 KMT2BQ9UMN6 2715 aaPredicted RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 KNTC1P50748 2209 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 KLHL33A6NCF5 533 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 OR52A4PA6NMU1 304 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 ITGA2BP08514 1039 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 PRSS56P0CW18 603 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 HGFP14210 728 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 PSMA3P25788 255 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 ACRV1P26436 265 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 MLLT3P42568 568 aaPredicted RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 ARSDP51689 593 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 EPHA4P54764 986 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 PCBP4P57723 403 aaKnown RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 CCDC173Q0VFZ6 552 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 TRIP13Q15645 432 aaPredicted RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 TSTD2Q5T7W7 516 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 METRNLQ641Q3 311 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 WDR74Q6RFH5 385 aaPredicted RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 MICALCLQ6ZW33 695 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 NLRP9Q7RTR0 991 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 RBM12BQ8IXT5 1001 aaKnown RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 CFAP206Q8IYR0 622 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 RCBTB1Q8NDN9 531 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 ZNF248Q8NDW4 579 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 COG1Q8WTW3 980 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 HDAC10Q969S8 669 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 NAF1Q96HR8 494 aaKnown RBP12.33□□□□□ -0.44
COMMD2-205ENST00000483708 CCDC74BQ96LY2 380 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 UCK1Q9HA47 277 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 PISDQ9UG56 409 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 ACSL5Q9ULC5 683 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 PSMD13Q9UNM6 376 aa12.33□□□□□ -0.44
COMMD2-205ENST00000483708 PTPRBP23467 1997 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 TRBV5-4A0A0C4DH59 114 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 PRAMEF33A0A0G2JMD5 474 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 CDRT15L2A8MXV6 281 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 AP3B1O00203 1094 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 PGRMC1O00264 195 aaKnown RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 SGTAO43765 313 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 UBXN7O94888 489 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 KRT14P02533 472 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 POLBP06746 335 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 AMD1P17707 334 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 CSF2RBP32927 897 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 DEKP35659 375 aaKnown RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 NPY2RP49146 381 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 TERF1P54274 439 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 SESN2P58004 480 aaPredicted RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 C16orf72Q14CZ0 275 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 RPE65Q16518 533 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 KCTD19Q17RG1 926 aaPredicted RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 PCID2Q5JVF3 399 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 SNAP47Q5SQN1 464 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 TTC27Q6P3X3 843 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 JAMLQ86YT9 394 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 PIANPQ8IYJ0 282 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 PPHLN1Q8NEY8 458 aaKnown RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 OR6P1Q8NGX9 317 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 ACTRT1Q8TDG2 376 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 CCDC97Q96F63 343 aaPredicted RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 LINC00615Q96LM1 132 aaPredicted RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 CCM2Q9BSQ5 444 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 EPB41L1Q9H4G0 881 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 SLC40A1Q9NP59 571 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 EIF2B3Q9NR50 452 aaKnown RBP12.32□□□□□ -0.44
COMMD2-205ENST00000483708 POT1Q9NUX5 634 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 PDP2Q9P2J9 529 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 FAM8A1Q9UBU6 413 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 SLC2A6Q9UGQ3 507 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 RIMKLBQ9ULI2 386 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 SNX12Q9UMY4 172 aa12.32□□□□□ -0.44
COMMD2-205ENST00000483708 TCAF1Q9Y4C2 921 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms