RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 LRP8Q14114 963 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 NFE2L1Q14494 772 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 BCL7AQ4VC05 210 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 PTRHD1Q6GMV3 140 aaKnown RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 CNSTQ6PJW8 725 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 CCNI2Q6ZMN8 369 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 KANSL1Q7Z3B3 1105 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 GKN2Q86XP6 184 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 RELL1Q8IUW5 271 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 SFTPA2Q8IWL1 248 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 CNTN4Q8IWV2 1026 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 CTAGE3PQ8IX95 158 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 KRT222Q8N1A0 295 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 EID2Q8N6I1 236 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 GABPB2Q8TAK5 448 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 LKAAEAR1Q8TD35 194 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 GPBAR1Q8TDU6 330 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 TCF12Q99081 682 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 PARD6BQ9BYG5 372 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 P2RY12Q9H244 342 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 INTS10Q9NVR2 710 aaKnown RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 SIRPGQ9P1W8 387 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 CXorf49A8MYA2 514 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-224ENST00000483359 ANXA6P08133 673 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 OR56A5P0C7T3 313 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 ZNF883P0CG24 379 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 STX2P32856 288 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 KBTBD12Q3ZCT8 623 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 CTSL3PQ5NE16 218 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 AMZ2Q86W34 360 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 LILRA3Q8N6C8 439 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-224ENST00000483359 MRRFQ96E11 262 aaKnown RBP17.54■□□□□ 0.4
CPNE1-224ENST00000483359 DPEP2Q9H4A9 486 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 GNPTGQ9UJJ9 305 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 PIKFYVEQ9Y2I7 2098 aa17.54■□□□□ 0.4
CPNE1-224ENST00000483359 NEMP2A6NFY4 417 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 B4DGG1 531 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 LMO7DNF2Z398 122 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 AP2A2O94973 939 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 TRIM16O95361 564 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 GIMD1P0DJR0 217 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 RPL10P27635 214 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 GABRB3P28472 473 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 PMS2P54278 862 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 FRG1Q14331 258 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 BRD3Q15059 726 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 FAM83HQ6ZRV2 1179 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 EIF1ADQ8N9N8 165 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 FAM46DQ8NEK8 389 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 CDKL2Q92772 493 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 CAMK1GQ96NX5 476 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 BIRC8Q96P09 236 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 NDNQ99608 321 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 TIMM29Q9BSF4 260 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 SPATS2LQ9NUQ6 558 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 TAAR2Q9P1P5 351 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 GULP1Q9UBP9 304 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 VPS9D1Q9Y2B5 631 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 ZFC3H1O60293 1989 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 PTPRZ1P23471 2315 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 ASCC3Q8N3C0 2202 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 NIPSNAP2O75323 286 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 SPAG6O75602 509 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 AHSGP02765 367 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 GSTA2P09210 222 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 CD59P13987 128 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 PHBP35232 272 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 LEPRP48357 1165 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 CSE1LP55060 971 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 BOP1Q14137 746 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 SUZ12Q15022 739 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 WDR93Q6P2C0 686 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 STRA8Q7Z7C7 330 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 PPM1NQ8N819 430 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 ELMO1Q92556 727 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 SARS2Q9NP81 518 aaKnown RBP17.53■□□□□ 0.4
CPNE1-224ENST00000483359 TBC1D29Q9UFV1 150 aa17.53■□□□□ 0.4
CPNE1-224ENST00000483359 FAM159BA6NKW6 160 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 TRIM38O00635 465 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 SH3BP5O60239 455 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 EML2O95834 649 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 C1QAP02745 245 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 FTH1P02794 183 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 MYF5P13349 255 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 VCLP18206 1134 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 RPS3P23396 243 aaKnown RBP eCLIP17.52■□□□□ 0.43e-8■■■□□ 18.5
CPNE1-224ENST00000483359 ARHGAP8P85298 464 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 SPNS2Q8IVW8 549 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 CFAP206Q8IYR0 622 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 OR2L2Q8NH16 312 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 PATE1Q8WXA2 126 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 CCM2Q9BSQ5 444 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 CCDC68Q9H2F9 335 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 PRDM8Q9NQV8 689 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 NLGN3Q9NZ94 848 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 PSMD13Q9UNM6 376 aa17.52■□□□□ 0.4
CPNE1-224ENST00000483359 PDZK1P1A8MUH7 402 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 QSOX1O00391 747 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 FLRT2O43155 660 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 GRK6P43250 576 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms