RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 FAM53AQ6NSI3 398 aaPredicted RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PLBD1Q6P4A8 553 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PQLC2Q6ZP29 291 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 RAPH1Q70E73 1250 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC46A3Q7Z3Q1 461 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 GALNTL5Q7Z4T8 443 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 UNC45BQ8IWX7 931 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 TAGAPQ8N103 731 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 TRIM58Q8NG06 486 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 NOC3LQ8WTT2 800 aaKnown RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 FCAMRQ8WWV6 532 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF653Q96CK0 615 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 KLHL15Q96M94 604 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 SPAG5Q96R06 1193 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 MRGBPQ9NV56 204 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PPP1R14DQ9NXH3 145 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 HCN3Q9P1Z3 774 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 NAALADL1Q9UQQ1 740 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 KLHL20Q9Y2M5 609 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 LYVE1Q9Y5Y7 322 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 CEPT1Q9Y6K0 416 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZCWPW2A0A1B0GU75 182 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 GAGE10A6NGK3 116 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 C19orf81C9J6K1 198 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 SNAP23O00161 211 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 TAF4O00268 1085 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 VCYO14598 125 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 SPINT2O43291 252 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CTSVO60911 334 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 F9P00740 461 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CD48P09326 243 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 PRSS56P0CW18 603 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CSH1P0DML2 217 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CSH2P0DML3 217 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 ERVK-10P10266 1014 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 LAMP2P13473 410 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 KIF5BP33176 963 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 ACTN2P35609 894 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 PSMB10P40306 273 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 TNNT3P45378 269 aaPredicted RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMF1P82094 1093 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 RUNX1T1Q06455 604 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 COL28A1Q2UY09 1125 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 TCP11X2Q5H9J9 407 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 FRG2Q64ET8 278 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 RPUSD3Q6P087 351 aaKnown RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 INO80CQ6PI98 192 aaPredicted RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CYP20A1Q6UW02 462 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 RRM2BQ7LG56 351 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCDC91Q7Z6B0 441 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 TRPT1Q86TN4 253 aaKnown RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 NRROSQ86YC3 692 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 MAP7D3Q8IWC1 876 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 APPL2Q8NEU8 664 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC44A1Q8WWI5 657 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMEM190Q8WZ59 177 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 JAKMIP2Q96AA8 810 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 KIF1BPQ96EK5 621 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CALML4Q96GE6 196 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCDC34Q96HJ3 373 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCDC43Q96MW1 224 aaKnown RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 ATOH8Q96SQ7 321 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 H2AFJQ9BTM1 129 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 IFIH1Q9BYX4 1025 aaKnown RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 XPO4Q9C0E2 1151 aaKnown RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 C2orf40Q9H1Z8 148 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 OR10A4Q9H209 315 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 ERVMER34-1Q9H9K5 563 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 GRPEL1Q9HAV7 217 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCDC177Q9NQR7 707 aaPredicted RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 TAS2R10Q9NYW0 307 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC25A10Q9UBX3 287 aaPredicted RBP2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 GTF3C4Q9UKN8 822 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 CAMK2AQ9UQM7 478 aa2.88□□□□□ -1.95
LAPTM4A-202ENST00000483117 hCG_1807616A0A1W2PRN6 198 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 H0Y626 953 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 LDLRAD4O15165 306 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 EIF3DO15371 548 aaKnown RBP eCLIP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF821O75541 412 aaPredicted RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 CLEC3BP05452 202 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ADRB2P07550 413 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 UBL4AP11441 157 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 COX7A2P14406 83 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 GNB3P16520 340 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ARCN1P48444 511 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 GNAQP50148 359 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 CLDN20P56880 219 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 IRX1P78414 480 aaPredicted RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 COG7P83436 770 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 MC1RQ01726 317 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 CREB5Q02930 508 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 TFCP2Q12800 502 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 BFSP1Q12934 665 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 STK4Q13043 487 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 PRICKLE4Q2TBC4 344 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC9B1Q4ZJI4 515 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 TECRLQ5HYJ1 363 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 PLEKHS1Q5SXH7 462 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 SNX30Q5VWJ9 437 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms