RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PAPOLBQ9NRJ5 636 aaKnown RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 SEMA4GQ9NTN9 838 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 TDP1Q9NUW8 608 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 TBC1D23Q9NUY8 699 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 SELENONQ9NZV5 590 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 ZNF624Q9P2J8 865 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 UXTQ9UBK9 157 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 ANAPC5Q9UJX4 755 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 HPCAL4Q9UM19 191 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 SLC8A2Q9UPR5 921 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 MED16Q9Y2X0 877 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 TP53BP1Q12888 1972 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 ABCA7Q8IZY2 2146 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 USP24Q9UPU5 2620 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 A0A0A6YYJ9 748 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 A0A0A6YYK5 440 aaPredicted RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 MBD3L4A6NDZ8 208 aaPredicted RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 MBD3L3A6NE82 208 aaPredicted RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 KPNA7A9QM74 516 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 ANKRD63C9JTQ0 380 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 E7EVH7 732 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 SLC30A4O14863 429 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 DNPH1O43598 174 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 HUS1O60921 280 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 ATG13O75143 517 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 PALMO75781 387 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 CCNDBP1O95273 360 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 GCNT3O95395 438 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 HEXBP07686 556 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 CCDC175P0C221 793 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 TMEM191BP0C7N4 346 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 TNNT1P13805 278 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 MALP21145 153 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 IL10P22301 178 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 IFNAR2P48551 515 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 MRPS21P82921 87 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 TFAMQ00059 246 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 DMWDQ09019 674 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 GRSF1Q12849 480 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLK1-212ENST00000482590 RUNX3Q13761 415 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 MTF1Q14872 753 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 RAB39AQ14964 217 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 OASLQ15646 514 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 CSRP2Q16527 193 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 ZC2HC1CQ53FD0 456 aaPredicted RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 ERMARDQ5T6L9 678 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 WSCD1Q658N2 575 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 PET117Q6UWS5 81 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 FAM83HQ6ZRV2 1179 aaPredicted RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 WDR5BQ86VZ2 330 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 EFCAB13Q8IY85 973 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 SYCP3Q8IZU3 236 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 CMTM8Q8IZV2 173 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 DPP10Q8N608 796 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 MAB21L3Q8N8X9 362 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 POMGNT2Q8NAT1 580 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 FIZ1Q96SL8 496 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 CRACR2AQ9BSW2 395 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 SOX7Q9BT81 388 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 CCSER1Q9C0I3 900 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 MRPL46Q9H2W6 279 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 ST6GALNAC4Q9H4F1 302 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 MTG2Q9H4K7 406 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 ZNF768Q9H5H4 540 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 OPA3Q9H6K4 179 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 MRPL44Q9H9J2 332 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 TRPC7Q9HCX4 862 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 SNTG1Q9NSN8 517 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 DDX43Q9NXZ2 648 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 PTGFRNQ9P2B2 879 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 DNAJB9Q9UBS3 223 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 HOOK1Q9UJC3 728 aaKnown RBP6.61□□□□□ -1.35
CLK1-212ENST00000482590 DAPP1Q9UN19 280 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 AP1M2Q9Y6Q5 423 aa6.61□□□□□ -1.35
CLK1-212ENST00000482590 CEP295Q9C0D2 2601 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 A0A1W2PQ09 198 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 PYCARD-AS1I3L0S3 204 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 CASQ2O14958 399 aaPredicted RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 TRIM24O15164 1050 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 TP73O15350 636 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 HOXA3O43365 443 aaPredicted RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 KLHL41O60662 606 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 RPP40O75818 363 aaKnown RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 SCAF4O95104 1147 aaKnown RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 EPN2O95208 641 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 OLFM2O95897 454 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 PNPP00491 289 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 KRT19P08727 400 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 IL1R2P27930 398 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 PBLDP30039 288 aaPredicted RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 GCH1P30793 250 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 GPR15P49685 360 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 HDAC4P56524 1084 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 RPL10AP62906 217 aaKnown RBP6.6□□□□□ -1.35
CLK1-212ENST00000482590 HTD2P86397 168 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 TLE1Q04724 770 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 ZBTB16Q05516 673 aa6.6□□□□□ -1.35
CLK1-212ENST00000482590 TARDBPQ13148 414 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLK1-212ENST00000482590 DCTN2Q13561 401 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms