RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 OSGEPL1Q9H4B0 414 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 WASH6PQ9NQA3 447 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 TBC1D29Q9UFV1 150 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 DNAJC16Q9Y2G8 782 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 FAM169AQ9Y6X4 670 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 KIR2DS5A0A0G2JLQ3 304 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 A0A0G2JNG1 304 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 A6NCN8 305 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 PDZK1P1A8MUH7 402 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 E7ESA3 106 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 KIR2DS3K7RE56 304 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 PRMT5O14744 637 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ZW10O43264 779 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 SNX2O60749 519 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 NDUFS3O75489 264 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ADRB1P08588 477 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 OGNP20774 298 aaKnown RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 FASLGP48023 281 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 BIRC2Q13490 618 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 THOC5Q13769 683 aaKnown RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 SEMA3AQ14563 771 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 KIR2DS5Q14953 304 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 SPANXN3Q5MJ09 141 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 RNF187Q5TA31 235 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 AGAP9Q5VTM2 703 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 METRNLQ641Q3 311 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 NEPROQ6NW34 567 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 GUSBP11Q6P575 273 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 IYDQ6PHW0 289 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ABRAXAS1Q6UWZ7 409 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 MICALCLQ6ZW33 695 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 CENPUQ71F23 418 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 EFL1Q7Z2Z2 1120 aaKnown RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 SLC9B2Q86UD5 537 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 CLDN19Q8N6F1 224 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 OTUD6BQ8N6M0 293 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 PNPLA1Q8N8W4 532 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 AVL9Q8NBF6 648 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 GPR150Q8NGU9 434 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 WDR48Q8TAF3 677 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 GABPB2Q8TAK5 448 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 MAPK15Q8TD08 544 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ART4Q93070 314 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 CCDC97Q96F63 343 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 FCRL3Q96P31 734 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 TRIM56Q9BRZ2 755 aaKnown RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 CCM2Q9BSQ5 444 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ABCG4Q9H172 646 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 STN1Q9H668 368 aaKnown RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 PRDM8Q9NQV8 689 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 GRHL1Q9NZI5 618 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 MARCH4Q9P2E8 410 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 LRIT1Q9P2V4 623 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ZC3H7BQ9UGR2 993 aaKnown RBP10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ACSL5Q9ULC5 683 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 VPS9D1Q9Y2B5 631 aa10.64□□□□□ -0.71
ATG4B-219ENST00000479941 ZFC3H1O60293 1989 aaKnown RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 GOLGA8KD6RF30 607 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 GOLGA8TH3BQL2 631 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 EIF3HO15372 352 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 ZNF500O60304 480 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 OR1I1O60431 355 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 BANF1O75531 89 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 EML2O95834 649 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 FTH1P02794 183 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 RPS3P23396 243 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 RPL10P27635 214 aaKnown RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 ELK3P41970 407 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 HALP42357 657 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 PLTPP55058 493 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 MAZP56270 477 aaKnown RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 PDIA2Q13087 525 aaKnown RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 NFE2L1Q14494 772 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 CRYMQ14894 314 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 TYSND1Q2T9J0 566 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 CCDC157Q569K6 752 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 PERM1Q5SV97 790 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 RAB44Q7Z6P3 723 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 LDB1Q86U70 411 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 LRRC6Q86X45 466 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 CILP2Q8IUL8 1156 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 SFTPA2Q8IWL1 248 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 CFAP206Q8IYR0 622 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 NOA1Q8NC60 698 aaKnown RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 HM13Q8TCT9 377 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 CALML6Q8TD86 181 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 SLC37A2Q8TED4 501 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 NAT14Q8WUY8 206 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 PATE1Q8WXA2 126 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 SEC14L1Q92503 715 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 CCDC74AQ96AQ1 378 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 SH3KBP1Q96B97 665 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 CCDC3Q9BQI4 270 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 TSSK1BQ9BXA7 367 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 PHACTR1Q9C0D0 580 aa10.63□□□□□ -0.71
ATG4B-219ENST00000479941 SARS2Q9NP81 518 aaKnown RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 C20orf96Q9NUD7 363 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-219ENST00000479941 TEX264Q9Y6I9 313 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms