RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 MCMBPQ9BTE3 642 aa13.34□□□□□ -0.27
NUDCD3-207ENST00000478769 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-207ENST00000478769 GULP1Q9UBP9 304 aa13.34□□□□□ -0.27
NUDCD3-207ENST00000478769 GNPTGQ9UJJ9 305 aa13.34□□□□□ -0.27
NUDCD3-207ENST00000478769 GPR34Q9UPC5 381 aa13.34□□□□□ -0.27
NUDCD3-207ENST00000478769 VPS9D1Q9Y2B5 631 aa13.34□□□□□ -0.27
NUDCD3-207ENST00000478769 PRR19A6NJB7 356 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 IQCF5A8MTL0 148 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 CDX4O14627 284 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 PFDN6O15212 129 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 YKT6O15498 198 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 AQP9O43315 295 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 DFNA5O60443 496 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 NIPSNAP2O75323 286 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 TUBBP07437 444 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 DGKAP23743 735 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 FMO4P31512 558 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 CD151P48509 253 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 ATXN3P54252 364 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 NAB1Q13506 487 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 LRP8Q14114 963 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 INSCQ1MX18 579 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 AASDHQ4L235 1098 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 RBM20Q5T481 1227 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 FAM83HQ6ZRV2 1179 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 GATAD2AQ86YP4 633 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 CTAGE3PQ8IX95 158 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 PPM1NQ8N819 430 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 GPBAR1Q8TDU6 330 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 SAP25Q8TEE9 199 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 UBLCP1Q8WVY7 318 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 ATXN7L3BQ96GX2 97 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 LINC00615Q96LM1 132 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 CYTH2Q99418 400 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 NDNQ99608 321 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 DNAAF2Q9NVR5 837 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 NSMCE4AQ9NXX6 385 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 SPASTQ9UBP0 616 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 FAM8A1Q9UBU6 413 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 KCNK6Q9Y257 313 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 DNAJC16Q9Y2G8 782 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 MED16Q9Y2X0 877 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 PCDHB1Q9Y5F3 818 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 PIKFYVEQ9Y2I7 2098 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 CFAP54Q96N23 3096 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 PIEZO1Q92508 2521 aa13.33□□□□□ -0.28
NUDCD3-207ENST00000478769 A0A087WUV0 522 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 QSOX1O00391 747 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 GDF9O60383 454 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 GFRA3O60609 400 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 POP7O75817 140 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 FAM155BO75949 473 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 ESR1P03372 595 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 OR56A5P0C7T3 313 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 CTSEP14091 401 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 PKMP14618 531 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 ITGB6P18564 788 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 HSD17B3P37058 310 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 ILF3Q12906 894 aaKnown RBP eCLIP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 SLC29A2Q14542 456 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 ELOCQ15369 112 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 PTRHD1Q6GMV3 140 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 SLC30A9Q6PML9 568 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 ZC3HC1Q86WB0 502 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 SPNS2Q8IVW8 549 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 SLC25A45Q8N413 288 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 FSTL5Q8N475 847 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 LILRA3Q8N6C8 439 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 FAM136AQ96C01 138 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 CPNE1Q99829 537 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 CCM2Q9BSQ5 444 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 TMEM9BQ9NQ34 198 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 KLC4Q9NSK0 619 aa13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 TDRD6O60522 2096 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-207ENST00000478769 MGAT4DA6NG13 374 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 LMO7DNF2Z398 122 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 FFAR2O15552 330 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 PCDHGA12O60330 932 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 FTH1P02794 183 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 ZNF883P0CG24 379 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 GIMD1P0DJR0 217 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 GP5P40197 560 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 ACTR1BP42025 376 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 CSE1LP55060 971 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 ACTR1AP61163 376 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 ARHGAP8P85298 464 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 TIAL1Q01085 375 aaKnown RBP eCLIP13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 DMPKQ09013 629 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 NFE2L1Q14494 772 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 KLHL38Q2WGJ6 581 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 DEFB133Q30KQ1 61 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 NAPRTQ6XQN6 538 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 TAF8Q7Z7C8 310 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 AMZ2Q86W34 360 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 MREGQ8N565 214 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 ACVR1CQ8NER5 493 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 OR2L2Q8NH16 312 aa13.31□□□□□ -0.28
NUDCD3-207ENST00000478769 GIMAP7Q8NHV1 300 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms