RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PDSS1Q5T2R2 415 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 STXBP5Q5T5C0 1151 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 FAM171BQ6P995 826 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 GDPD4Q6W3E5 623 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 KCTD8Q6ZWB6 473 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 DSG4Q86SJ6 1040 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 CEP97Q8IW35 865 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 OR13A1Q8NGR1 328 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 JAKMIP2Q96AA8 810 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 LRRC59Q96AG4 307 aaKnown RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 EPYCQ99645 322 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 GFI1Q99684 422 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 POLR3CQ9BUI4 534 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 ARHGEF38Q9NXL2 777 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 NKIRAS2Q9NYR9 191 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 DNAJB4Q9UDY4 337 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 SEC63Q9UGP8 760 aaKnown RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 TSPYL4Q9UJ04 414 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 MAGED1Q9Y5V3 778 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 A0A1W2PR77 199 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 IFITM10A6NMD0 228 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 C15orf62A8K5M9 175 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 TMEM189-UBE2V1I3L0A0 370 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 J3QR06 171 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 DVL1O14640 695 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 CAPN9O14815 690 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 RSL1D1O76021 490 aaKnown RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 SAT1P21673 171 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 OAS2P29728 719 aaKnown RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 ARCN1P48444 511 aaKnown RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 HOXA1P49639 335 aaPredicted RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 DVL1P1P54792 670 aaPredicted RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 PPP2R2BQ00005 443 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 RUNX1T1Q06455 604 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 GAGE5Q13069 117 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 GAGE6Q13070 117 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 UBE2V1Q13404 147 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 KRT33BQ14525 404 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 Q75L30 129 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 ZNF534Q76KX8 674 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 ZNF771Q7L3S4 317 aaPredicted RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 CHCHD4Q8N4Q1 142 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 C1orf52Q8N6N3 182 aaKnown RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 POC5Q8NA72 575 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 KBTBD3Q8NAB2 608 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 DMBX1Q8NFW5 382 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 RDM1Q8NG50 284 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 OR52I2Q8NH67 350 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 RSPH1Q8WYR4 309 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 LINGO1Q96FE5 620 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 CEP295NLQ96MC4 621 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 NUDT16L1Q9BRJ7 211 aaKnown RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 HGH1Q9BTY7 390 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 TEX12Q9BXU0 123 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 OSGEPL1Q9H4B0 414 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 ZCCHC17Q9NP64 241 aaKnown RBP3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 KLHL9Q9P2J3 617 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 PCDHGB4Q9UN71 923 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 YIPF1Q9Y548 306 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 PCDHGA5Q9Y5G8 931 aa3.77□□□□□ -1.81
SMARCA1-204ENST00000478420 CNTNAP2Q9UHC6 1331 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 OR2A25A4D2G3 310 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 PRR23D1E9PI22 279 aaPredicted RBP3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 BMPR1BO00238 502 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 NDUFS4O43181 175 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 GJB3O75712 270 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 ZNF432O94892 652 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 BMP10O95393 424 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 CRYAAP02489 173 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 PTMAP06454 111 aaKnown RBP3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 PRR23D2P0DMB1 279 aaPredicted RBP3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 GM2AP17900 193 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 ACSL1P33121 698 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 NRIP1P48552 1158 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 SUOXP51687 545 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 PNLIPRP2P54317 469 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 TMF1P82094 1093 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 ARL16Q0P5N6 197 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 GAGE2BQ13066 116 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 DLG2Q15700 870 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 GAGE2EQ4V326 116 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 RAB6CQ53S08 254 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 SIRPB2Q5JXA9 342 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 GAGE2AQ6NT46 116 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 ZNF852Q6ZMS4 543 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 SNX32Q86XE0 403 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 GALNT13Q8IUC8 556 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 GBGT1Q8N5D6 347 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 LMNTD1Q8N9Z9 388 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 OXNAD1Q96HP4 312 aaPredicted RBP3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 ZMAT2Q96NC0 199 aaKnown RBP3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 ZNF583Q96ND8 569 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 INPP4AQ96PE3 977 aaPredicted RBP3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 RTN4RQ9BZR6 473 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 RAB6CQ9H0N0 254 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 SEMA6AQ9H2E6 1030 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 TCF7L2Q9NQB0 619 aa3.76□□□□□ -1.81
SMARCA1-204ENST00000478420 MRGBPQ9NV56 204 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms