RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 E5RI56 91 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 SCAMP1O15126 338 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 CDH16O75309 829 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 VPS26AO75436 327 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 KRT38O76015 456 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 TRIM16O95361 564 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 TNFP01375 233 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 CNTFP26441 200 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 CTSKP43235 329 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 BLKP51451 505 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 HK3P52790 923 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 BNC1Q01954 994 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 ZNF844Q08AG5 666 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 INSCQ1MX18 579 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 KIF19Q2TAC6 998 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 ZNF542PQ5EBM4 170 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 TRIM61Q5EBN2 209 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 MROH9Q5TGP6 573 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 SLC23A3Q6PIS1 610 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 CHST15Q7LFX5 561 aaPredicted RBP15.93■□□□□ 0.14
VHL-203ENST00000477538 C11orf96Q7Z7L8 435 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 PHACTR4Q8IZ21 702 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 DCLK2Q8N568 766 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 ACVR1CQ8NER5 493 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 KCNJ9Q92806 393 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 LINC00615Q96LM1 132 aaPredicted RBP15.93■□□□□ 0.14
VHL-203ENST00000477538 CCM2Q9BSQ5 444 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 TMEM109Q9BVC6 243 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 CAPN10Q9HC96 672 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 TBK1Q9UHD2 729 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 KLF15Q9UIH9 416 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 SLC39A10Q9ULF5 831 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 SNX11Q9Y5W9 270 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 DNMT3AQ9Y6K1 912 aaPredicted RBP15.93■□□□□ 0.14
VHL-203ENST00000477538 IQANK1A0A1B0GTG1 560 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 HMX2A2RU54 273 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 DYNC1I1O14576 645 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 POP7O75817 140 aaKnown RBP15.92■□□□□ 0.14
VHL-203ENST00000477538 KRT37O76014 449 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 CSF2P04141 144 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 GSTM1P09488 218 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 ACP5P13686 325 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 NME1P15531 152 aaKnown RBP15.92■□□□□ 0.14
VHL-203ENST00000477538 JUNDP17535 347 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 CHRM3P20309 590 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 SAT1P21673 171 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 FDXRP22570 491 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 NBL1P41271 181 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 SLC12A2P55011 1212 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 CDKN2DP55273 166 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 POU4F1Q01851 419 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 GSTM4Q03013 218 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 GRIK2Q13002 908 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 RASA2Q15283 850 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 TMED2Q15363 201 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 CCDC6Q16204 474 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 KRT71Q3SY84 523 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 CEP85LQ5SZL2 805 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 LGSNQ5TDP6 509 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 RIBC1Q8N443 379 aaPredicted RBP15.92■□□□□ 0.14
VHL-203ENST00000477538 OXR1Q8N573 874 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 FAM136AQ96C01 138 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 RUFY1Q96T51 708 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 GPR21Q99679 349 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 OLFM1Q99784 485 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 TIMM29Q9BSF4 260 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 SLC13A1Q9BZW2 595 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 TCEAL2Q9H3H9 227 aaPredicted RBP15.92■□□□□ 0.14
VHL-203ENST00000477538 ERVMER34-1Q9H9K5 563 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 CAB39LQ9H9S4 337 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 SARS2Q9NP81 518 aaKnown RBP15.92■□□□□ 0.14
VHL-203ENST00000477538 TM7SF3Q9NS93 570 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 EURLQ9NYK6 297 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 TAS2R13Q9NYV9 303 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 APOBEC3BQ9UH17 382 aaKnown RBP15.92■□□□□ 0.14
VHL-203ENST00000477538 GMEB2Q9UKD1 530 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 SLC6A14Q9UN76 642 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 MED16Q9Y2X0 877 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 VWA7Q9Y334 891 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 OTOGLQ3ZCN5 2332 aa15.92■□□□□ 0.14
VHL-203ENST00000477538 PCM1Q15154 2024 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 MGAT4DA6NG13 374 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 TRIM49D1C9J1S8 452 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 H3BM21 787 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 RETP07949 1114 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 SNRPAP09012 282 aaKnown RBP15.91■□□□□ 0.14
VHL-203ENST00000477538 CTSEP14091 401 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 CD9P21926 228 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 TAS2R39P59534 338 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 ARHGAP8P85298 464 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 TIAL1Q01085 375 aaKnown RBP eCLIP15.91■□□□□ 0.14
VHL-203ENST00000477538 USP10Q14694 798 aaKnown RBP15.91■□□□□ 0.14
VHL-203ENST00000477538 PLA2G2CQ5R387 149 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 UGT3A1Q6NUS8 523 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 AMZ2Q86W34 360 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 CNPY4Q8N129 248 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 OR2L2Q8NH16 312 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 ELMO1Q92556 727 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 TSPAN17Q96FV3 270 aa15.91■□□□□ 0.14
VHL-203ENST00000477538 NUSAP1Q9BXS6 441 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms