RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PDE7BQ9NP56 450 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SLAMF7Q9NQ25 335 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 MYO1AQ9UBC5 1043 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 PSMD13Q9UNM6 376 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SHOC2Q9UQ13 582 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SLC5A6Q9Y289 635 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF451Q9Y4E5 1061 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 TTLL3Q9Y4R7 772 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SPO11Q9Y5K1 396 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 CFAP20Q9Y6A4 193 aaKnown RBP9.55□□□□□ -0.88
COL4A5-204ENST00000477429 DCHS2Q6V1P9 2916 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 LGALS16A8MUM7 142 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 MATN3O15232 486 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 SCRG1O75711 98 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 RNF8O76064 485 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 SLC4A1P02730 911 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 FTLP02792 175 aaPredicted RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 MT-ND3P03897 115 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 PYGLP06737 847 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 BPIP17213 487 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 RORAP35398 523 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 PCK1P35558 622 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 CD86P42081 329 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 NOP2P46087 812 aaKnown RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 CTSCP53634 463 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 RPS15P62841 145 aaKnown RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 GBE1Q04446 702 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 GALNT2Q10471 571 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 ZBTB17Q13105 803 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 NOMO1Q15155 1222 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 RPE65Q16518 533 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 PTCHD3Q3KNS1 767 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 ANO6Q4KMQ2 910 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 ANKRD20A8PQ5CZ79 823 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 IZUMO3Q5VZ72 239 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 MICALCLQ6ZW33 695 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 B4GALNT4Q76KP1 1039 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 LRRTM4Q86VH4 590 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 D2HGDHQ8N465 521 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 GLIS1Q8NBF1 620 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 ENOX1Q8TC92 643 aaKnown RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 ZDHHC12Q96GR4 267 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF514Q96K75 400 aaPredicted RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 BARD1Q99728 777 aaKnown RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 NUP85Q9BW27 656 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 CEP41Q9BYV8 373 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 RAB33BQ9H082 229 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 POT1Q9NUX5 634 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 LIMA1Q9UHB6 759 aaKnown RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 TCFL5Q9UL49 500 aa9.54□□□□□ -0.88
COL4A5-204ENST00000477429 DIDO1Q9BTC0 2240 aaKnown RBP9.54□□□□□ -0.88
COL4A5-204ENST00000477429 ANKUB1A6NFN9 424 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 ANKRD66B4E2M5 251 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 MEN1O00255 615 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 KMOO15229 486 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 DPM1O60762 260 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 JCHAINP01591 159 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 CTSBP07858 339 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 ATP1A3P13637 1013 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 ARL4AP40617 200 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 KPNA2P52292 529 aaKnown RBP9.53□□□□□ -0.88
COL4A5-204ENST00000477429 UBXN1Q04323 297 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 CDK18Q07002 472 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 ATP13A5Q4VNC0 1218 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF569Q5MCW4 686 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 FKBP15Q5T1M5 1219 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 AGAP9Q5VTM2 703 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 TMC3Q7Z5M5 1100 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 CUZD1Q86UP6 607 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 RHOT1Q8IXI2 618 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 DSELQ8IZU8 1212 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 BBS5Q8N3I7 341 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 PQLC3Q8N755 202 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 OR1L3Q8NH93 324 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 MARVELD3Q96A59 401 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 CXorf40BQ96DE9 158 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 C5orf34Q96MH7 638 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 ERGIC2Q96RQ1 377 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 MDFIQ99750 246 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 TIMM29Q9BSF4 260 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 TLR10Q9BXR5 811 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 HAUS4Q9H6D7 363 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 BPIFA1Q9NP55 256 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 WASH6PQ9NQA3 447 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 PCMTD2Q9NV79 361 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 PKD2L2Q9NZM6 624 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 RTTNQ86VV8 2226 aa9.53□□□□□ -0.88
COL4A5-204ENST00000477429 MDC1Q14676 2089 aaKnown RBP9.52□□□□□ -0.88
COL4A5-204ENST00000477429 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 LRRC53A6NM62 1247 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 KCNK1O00180 336 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 E2F3O00716 465 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 HCRTR1O43613 425 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 CPNE3O75131 537 aaKnown RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 CNOT3O75175 753 aaKnown RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 MTA2O94776 668 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 SKILP12757 684 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 FERP16591 822 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 ZNF165P49910 485 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms