RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GRID2O43424 1007 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 EPN2O95208 641 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 ADH1AP07327 375 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 C8AP07357 584 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 PRKAG1P54619 331 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SMARCB1Q12824 385 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 MAPK11Q15759 364 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 CTC1Q2NKJ3 1217 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SMYD5Q6GMV2 418 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SHKBP1Q8TBC3 707 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 LRRC58Q96CX6 371 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 KLHL32Q96NJ5 620 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 CHID1Q9BWS9 393 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 TFB2MQ9H5Q4 396 aaKnown RBP10.89□□□□□ -0.67
COL27A1-204ENST00000477421 CLK4Q9HAZ1 481 aaKnown RBP10.89□□□□□ -0.67
COL27A1-204ENST00000477421 OSER1Q9NX31 292 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SMIM31A0A1B0GVY4 71 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 AHCYL1O43865 530 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 CYBAP13498 195 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SPAM1P38567 509 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 INPP1P49441 399 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 FAM171BQ6P995 826 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SERPINA13PQ6UXR4 307 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 CERS6Q6ZMG9 384 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 PHACTR4Q8IZ21 702 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 C8orf59Q8N0T1 100 aaPredicted RBP10.89□□□□□ -0.67
COL27A1-204ENST00000477421 LIX1Q8N485 282 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SOX17Q9H6I2 414 aaPredicted RBP10.89□□□□□ -0.67
COL27A1-204ENST00000477421 CERS4Q9HA82 394 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 LIN7AO14910 233 aaPredicted RBP10.89□□□□□ -0.67
COL27A1-204ENST00000477421 BCL10O95999 233 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 MTHFRP42898 656 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 NUP107P57740 925 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 SH3BP2P78314 561 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 ABRAXAS1Q6UWZ7 409 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 TMCO5AQ8N6Q1 288 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 TRPV1Q8NER1 839 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 ASB9Q96DX5 294 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 LIN28AQ9H9Z2 209 aaKnown RBP10.89□□□□□ -0.67
COL27A1-204ENST00000477421 RASSF1Q9NS23 344 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 TBC1D30Q9Y2I9 924 aa10.89□□□□□ -0.67
COL27A1-204ENST00000477421 DLEC1Q9Y238 1755 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ILVBLA1L0T0 632 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 CAPN14A8MX76 684 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 HAS3O00219 553 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 RGS5O15539 181 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 KERAO60938 352 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 RNASEH2AO75792 299 aaKnown RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 IFNA8P32881 189 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 CYP4F2P78329 520 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 PLA2G4EQ3MJ16 856 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF549Q6P9A3 640 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 Q6ZVU0 165 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 KBTBD2Q8IY47 623 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF461Q8TAF7 563 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 BBIP1A8MTZ0 92 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 UPK3BL1B0FP48 263 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 UPK3BL2E5RIL1 263 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 STK25O00506 426 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 NOBOXO60393 691 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ELFN1P0C7U0 828 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 G6PDP11413 515 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 MAPK8P45983 427 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 GPR1P46091 355 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 LEPRP48357 1165 aaKnown RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 STK19P49842 368 aaPredicted RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF33AQ06730 810 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 CHIT1Q13231 466 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 TGFBIQ15582 683 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 OR4D1Q15615 310 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 UNC50Q53HI1 259 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 CHST15Q7LFX5 561 aaPredicted RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 SPATA19Q7Z5L4 167 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ISCA2Q86U28 154 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ADHFE1Q8IWW8 467 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 DDHD1Q8NEL9 900 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 OR52B6Q8NGF0 335 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 BTBD9Q96Q07 612 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 INTS10Q9NVR2 710 aaKnown RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 VPS51Q9UID3 782 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 PCDHB1Q9Y5F3 818 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 SPO11Q9Y5K1 396 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 DNAJC15Q9Y5T4 150 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 SCN1AP35498 2009 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 GLUD1P00367 558 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 GSTM1P09488 218 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 GSK3BP49841 420 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 HTRA3P83110 453 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 XIAPP98170 497 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 FGD3Q5JSP0 725 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 CCDC149Q6ZUS6 474 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 TMPRSS11BQ86T26 416 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 ZC3H7AQ8IWR0 971 aaKnown RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 FAM9CQ8IZT9 166 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 OR4F6Q8NGB9 312 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 PSKH2Q96QS6 385 aa10.88□□□□□ -0.67
COL27A1-204ENST00000477421 CHCHD3Q9NX63 227 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms