RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
NUP188-205ENST00000477069 SLC39A3Q9BRY0 314 aa11.34□□□□□ -0.59
NUP188-205ENST00000477069 PCDHAC1Q9H158 963 aa11.34□□□□□ -0.59
NUP188-205ENST00000477069 TLR9Q9NR96 1032 aa11.34□□□□□ -0.59
NUP188-205ENST00000477069 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
NUP188-205ENST00000477069 HECAQ9UBI9 543 aaPredicted RBP11.34□□□□□ -0.59
NUP188-205ENST00000477069 PIKFYVEQ9Y2I7 2098 aa11.34□□□□□ -0.59
NUP188-205ENST00000477069 ALPK3Q96L96 1907 aa11.33□□□□□ -0.59
NUP188-205ENST00000477069 TCRBV3S1A0A5B6 114 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 CRCPO75575 148 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 SLC25A14O95258 325 aaPredicted RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 DDX6P26196 483 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP188-205ENST00000477069 PTSQ03393 145 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 SAMD4BQ5PRF9 694 aaKnown RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 LRRC66Q68CR7 880 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 ZBTB2Q8N680 514 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 PCYOX1LQ8NBM8 494 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 SLC45A3Q96JT2 553 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 TEX37Q96LM6 180 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 CDK15Q96Q40 435 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 ACOX2Q99424 681 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 SUV39H2Q9H5I1 410 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 NOL11Q9H8H0 719 aaKnown RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 TNPO3Q9Y5L0 923 aaKnown RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 DPPA5A6NC42 116 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 MAGEA13PA6NCF6 341 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 GRM6O15303 877 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 UQCRBP14927 111 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 ITGB6P18564 788 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 CCNHP51946 323 aaPredicted RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 SLC7A2P52569 658 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 RHDQ02161 417 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 TRAF3Q13114 568 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 VPS26BQ4G0F5 336 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 PDCD4Q53EL6 469 aaKnown RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 OR52E8Q6IFG1 317 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 LAYNQ6UX15 382 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 Q6ZSR9 355 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 UBTD2Q8WUN7 234 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 SLCO4A1Q96BD0 722 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 PKP2Q99959 881 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 HOPXQ9BPY8 73 aaPredicted RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 TMEM79Q9BSE2 394 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 EMILIN2Q9BXX0 1053 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 LZTS1Q9Y250 596 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 SLC4A7Q9Y6M7 1214 aa11.33□□□□□ -0.6
NUP188-205ENST00000477069 NUP210Q8TEM1 1887 aaPredicted RBP11.33□□□□□ -0.6
NUP188-205ENST00000477069 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 A8MX80 341 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 NME4O00746 187 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 RAD51BO15315 384 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 RNASEH1O60930 286 aaKnown RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 DGKAP23743 735 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 ATXN3P54252 364 aaPredicted RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 ERVK-8P63133 956 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 YBX1P67809 324 aaKnown RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 B4GALNT1Q00973 533 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 SEMG2Q02383 582 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 GTF2H2Q13888 395 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 TEAD2Q15562 447 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 CRY1Q16526 586 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 SLC5A9Q2M3M2 681 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 CARD16Q5EG05 197 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 IRAK1BP1Q5VVH5 260 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 GTF2H2CQ6P1K8 395 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 FRA10AC1Q70Z53 315 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 KIAA0907Q7Z7F0 614 aaPredicted RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 MYO1HQ8N1T3 1032 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 CDYL2Q8N8U2 506 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 MRPL43Q8N983 215 aaKnown RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 BTBD9Q96Q07 612 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 TMEM45AQ9NWC5 275 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 GMPR2Q9P2T1 348 aaKnown RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 CRLS1Q9UJA2 301 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 WASH3PC4AMC7 463 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 C9JVG2 144 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 RNASEH2AO75792 299 aaKnown RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 CHEK2O96017 543 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 C1SP09871 688 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 RGS4P49798 205 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 FOXM1Q08050 763 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 ZNF77Q15935 545 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 PHKG1Q16816 387 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 C6orf136Q5SQH8 315 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 PRMT9Q6P2P2 845 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 DPY19L3Q6ZPD9 716 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 RNF165Q6ZSG1 346 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 ADIPOR2Q86V24 386 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 CHCHD4Q8N4Q1 142 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 DCBLD1Q8N8Z6 715 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 OR4F6Q8NGB9 312 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 DCUN1D1Q96GG9 259 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 ZNF641Q96N77 438 aaPredicted RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 BEGAINQ9BUH8 593 aa11.32□□□□□ -0.6
NUP188-205ENST00000477069 FAM126AQ9BYI3 521 aaPredicted RBP11.32□□□□□ -0.6
NUP188-205ENST00000477069 COPS7BQ9H9Q2 264 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms