RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 PLAC1Q9HBJ0 212 aa12.22□□□□□ -0.45
APTX-220ENST00000476858 ZDHHC3Q9NYG2 299 aa12.22□□□□□ -0.45
APTX-220ENST00000476858 CLCA2Q9UQC9 943 aa12.22□□□□□ -0.45
APTX-220ENST00000476858 ENTPD2Q9Y5L3 495 aa12.22□□□□□ -0.45
APTX-220ENST00000476858 CFAP20Q9Y6A4 193 aaKnown RBP12.22□□□□□ -0.45
APTX-220ENST00000476858 IGF2RP11717 2491 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 IQCF5A8MTL0 148 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 DNALI1O14645 258 aaPredicted RBP12.21□□□□□ -0.45
APTX-220ENST00000476858 F3P13726 295 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 CASQ1P31415 396 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 CLCNKAP51800 687 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 UBE2IP63279 158 aaKnown RBP12.21□□□□□ -0.45
APTX-220ENST00000476858 PDE1BQ01064 536 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 E2F1Q01094 437 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 CACNG1Q06432 222 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 GTF2H3Q13889 308 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 NR1D2Q14995 579 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 PPP1R7Q15435 360 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 SKIDA1Q1XH10 827 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 ISXQ2M1V0 245 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 BCL7AQ4VC05 210 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 ZNF789Q5FWF6 425 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 HP1BP3Q5SSJ5 553 aaPredicted RBP12.21□□□□□ -0.45
APTX-220ENST00000476858 C4orf22Q6V702 233 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 PPHLN1Q8NEY8 458 aaKnown RBP12.21□□□□□ -0.45
APTX-220ENST00000476858 OR6P1Q8NGX9 317 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 SLCO2A1Q92959 643 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 GLMNQ92990 594 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 NAT6Q93015 286 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 SIGLEC10Q96LC7 697 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 RMDN2Q96LZ7 410 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 TTC25Q96NG3 672 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 COPS8Q99627 209 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 KIFC1Q9BW19 673 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 TRIM31Q9BZY9 425 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 ABCG4Q9H172 646 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 SEMA6CQ9H3T2 930 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 OGFRQ9NZT2 677 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 ASIC3Q9UHC3 531 aa12.21□□□□□ -0.45
APTX-220ENST00000476858 DMXL2Q8TDJ6 3036 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 ZZEF1O43149 2961 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 IGHV1OR21-1A0A087WYE8 117 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 GOLGA6L10A0A0M3HER8 536 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 RHPN2P1A8MT19 583 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 PDZK1P1A8MUH7 402 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 GPR89AB7ZAQ6 455 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 D6RAR5 112 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 NUDT21O43809 227 aaKnown RBP12.2□□□□□ -0.46
APTX-220ENST00000476858 MPOP05164 745 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 POLBP06746 335 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 GPR89BP0CG08 455 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 HGFP14210 728 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 ATP1B2P14415 290 aaPredicted RBP12.2□□□□□ -0.46
APTX-220ENST00000476858 ITGB6P18564 788 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 PDHA2P29803 388 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 PREPP48147 710 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 ARCN1P48444 511 aaKnown RBP12.2□□□□□ -0.46
APTX-220ENST00000476858 NPY2RP49146 381 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 PRLHRP49683 370 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 DR1Q01658 176 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 CYP4F3Q08477 520 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 TRADDQ15628 312 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 GPR33Q49SQ1 333 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 IZUMO3Q5VZ72 239 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 AMZ2Q86W34 360 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 GALNT15Q8N3T1 639 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 MCUQ8NE86 351 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 OR4L1Q8NH43 312 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 ULK4Q96C45 1275 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 LRRC45Q96CN5 670 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 PRR11Q96HE9 360 aaPredicted RBP12.2□□□□□ -0.46
APTX-220ENST00000476858 INSM2Q96T92 566 aaPredicted RBP12.2□□□□□ -0.46
APTX-220ENST00000476858 C19orf43Q9BQ61 176 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 WWP1Q9H0M0 922 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 NCKIPSDQ9NZQ3 722 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 BFARQ9NZS9 450 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 CPNE7Q9UBL6 633 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 RIMKLBQ9ULI2 386 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 SOX13Q9UN79 622 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 KIF26BQ2KJY2 2108 aa12.2□□□□□ -0.46
APTX-220ENST00000476858 CELSR3Q9NYQ7 3312 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 ZCWPW2A0A1B0GU75 182 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 RAD51CO43502 376 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 VAPBO95292 243 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 GAS8O95995 478 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 RPL21P46778 160 aaKnown RBP12.19□□□□□ -0.46
APTX-220ENST00000476858 FASLGP48023 281 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 PPP1CAP62136 330 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 CDK16Q00536 496 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 HHEXQ03014 270 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 DMPKQ09013 629 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 SPIDRQ14159 915 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 BRD3Q15059 726 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 RPE65Q16518 533 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 METRNLQ641Q3 311 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 AFTPHQ6ULP2 937 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 ABRAXAS1Q6UWZ7 409 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 RBM44Q6ZP01 1051 aaKnown RBP12.19□□□□□ -0.46
APTX-220ENST00000476858 SLITRK4Q8IW52 837 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 PPIL6Q8IXY8 311 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms