RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SMAD3P84022 425 aaKnown RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CDKL1Q00532 357 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 RCAN2Q14206 197 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 TGFBIQ15582 683 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ADRM1Q16186 407 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 C6orf52Q5T4I8 152 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 THEMIS2Q5TEJ8 643 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 FAM109BQ6ICB4 259 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 LCN8Q6JVE9 175 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 LINGO4Q6UY18 593 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CARNMT1Q8N4J0 409 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 MRPL43Q8N983 215 aaKnown RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 DDI1Q8WTU0 396 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 PPWD1Q96BP3 646 aaKnown RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 GPR63Q9BZJ6 419 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 TRIM4Q9C037 500 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 SEMA6AQ9H2E6 1030 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ZIM2Q9NZV7 527 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CNOT6Q9ULM6 557 aaKnown RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ZNF711Q9Y462 761 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 COMMD3-BMI1R4GMX3 469 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CCL16O15467 120 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 GREM1O60565 184 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 IL10P22301 178 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CLCN7P51798 805 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 HK3P52790 923 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ECT2LQ008S8 904 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CAMK1Q14012 370 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 PCBP2Q15366 365 aaKnown RBP eCLIP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ARMC12Q5T9G4 340 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 FAM219BQ5XKK7 198 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ERMP1Q7Z2K6 904 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ADAMTSL2Q86TH1 951 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 HOMEZQ8IX15 550 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CPNE9Q8IYJ1 553 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CANT1Q8WVQ1 401 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 HCFC1R1Q9NWW0 138 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 ZNF225Q9UK10 706 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 PCDHB9Q9Y5E1 797 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 PCDHA9Q9Y5H5 950 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 OR51B4Q9Y5P0 310 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 CPQQ9Y646 472 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 A0A1W2PRU2 124 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 GRXCR2A6NFK2 248 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 EEDO75530 441 aaKnown RBP16.24■□□□□ 0.19
TMEM53-208ENST00000476724 SLC22A3O75751 556 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 GLUD1P00367 558 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 ZNF7P17097 686 aaPredicted RBP16.24■□□□□ 0.19
TMEM53-208ENST00000476724 RPS3P23396 243 aaKnown RBP eCLIP16.24■□□□□ 0.19
TMEM53-208ENST00000476724 MZF1P28698 734 aaPredicted RBP16.24■□□□□ 0.19
TMEM53-208ENST00000476724 DIO3P55073 304 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 MYBPC1Q00872 1141 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 C9orf50Q5SZB4 431 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 PACRGLQ8N7B6 248 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 DCAF4L2Q8NA75 395 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 LRCH3Q96II8 777 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 EMILIN2Q9BXX0 1053 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 IL1RL2Q9HB29 575 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 VCX3AQ9NNX9 186 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 TLR9Q9NR96 1032 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 CMTM6Q9NX76 183 aa16.24■□□□□ 0.19
TMEM53-208ENST00000476724 DNMT3BQ9UBC3 853 aaKnown RBP16.24■□□□□ 0.19
TMEM53-208ENST00000476724 LEF1Q9UJU2 399 aaPredicted RBP16.24■□□□□ 0.19
TMEM53-208ENST00000476724 KANSL1LA0AUZ9 987 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 ZNF839A8K0R7 811 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 GRM6O15303 877 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 ATP6V1B2P21281 511 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 PRDX3P30048 256 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 CCR2P41597 374 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 NFYCQ13952 458 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 NAIF1Q69YI7 327 aaPredicted RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 CWF19L1Q69YN2 538 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 RETSATQ6NUM9 610 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 PPP4R4Q6NUP7 873 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 CCDC149Q6ZUS6 474 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 CHERPQ8IWX8 916 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 DGCR14Q96DF8 476 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 SLC45A3Q96JT2 553 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 CORO1BQ9BR76 489 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 NOL11Q9H8H0 719 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 C8orf4Q9NR00 106 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 SUN2Q9UH99 717 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 DHRS12A0PJE2 317 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 FAM234BA2RU67 622 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 C7orf72A4D263 438 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 CCDC154A6NI56 674 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 AKAP10O43572 662 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 RFPL2O75678 378 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 OR4F21O95013 312 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 PGLSO95336 258 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 S100BP04271 92 aaPredicted RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 TFAP2AP05549 437 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 PSMA4P25789 261 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 POLR2JP52435 117 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 NRF1Q16656 503 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 ATP6AP1LQ52LC2 224 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 FBXO48Q5FWF7 155 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 MTX3Q5HYI7 312 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms