RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SOX13Q9UN79 622 aa15.46■□□□□ 0.07
CPSF3-203ENST00000475482 ST14Q9Y5Y6 855 aa15.46■□□□□ 0.07
CPSF3-203ENST00000475482 IGSF10Q6WRI0 2623 aa15.46■□□□□ 0.06
CPSF3-203ENST00000475482 TLDC2A0PJX2 215 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 HEATR9A2RTY3 570 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 HMGB1P1B2RPK0 211 aaPredicted RBP15.45■□□□□ 0.06
CPSF3-203ENST00000475482 RGS16O15492 202 aaPredicted RBP15.45■□□□□ 0.06
CPSF3-203ENST00000475482 CLDN7O95471 211 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 SHBGP04278 402 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 GLB1P16278 677 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 ADRA1DP25100 572 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 GPR1P46091 355 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 EPHB1P54762 984 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 NAB1Q13506 487 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 RASA2Q15283 850 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 TCEA2Q15560 299 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 COL28A1Q2UY09 1125 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 CERCAMQ5T4B2 595 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 AGBL2Q5U5Z8 902 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 C19orf48Q6RUI8 117 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 UNC5AQ6ZN44 842 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 TDRPQ86YL5 185 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 IGDCC3Q8IVU1 814 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 SFTPA2Q8IWL1 248 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 FAM46DQ8NEK8 389 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 LPCAT1Q8NF37 534 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 FBF1Q8TES7 1133 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 CCDC74AQ96AQ1 378 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 EID2BQ96D98 161 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 PGM2Q96G03 612 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 PRR11Q96HE9 360 aaPredicted RBP15.45■□□□□ 0.06
CPSF3-203ENST00000475482 HIC2Q96JB3 615 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 RANBP9Q96S59 729 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 SRPK1Q96SB4 655 aaKnown RBP15.45■□□□□ 0.06
CPSF3-203ENST00000475482 AGAP2Q99490 1192 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 CENPHQ9H3R5 247 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 CARS2Q9HA77 564 aaKnown RBP15.45■□□□□ 0.06
CPSF3-203ENST00000475482 TMBIM4Q9HC24 238 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 ASCL3Q9NQ33 180 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 FAM53CQ9NYF3 392 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 CD84Q9UIB8 345 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 CNOT6Q9ULM6 557 aaKnown RBP15.45■□□□□ 0.06
CPSF3-203ENST00000475482 SUFUQ9UMX1 484 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 PCDHGA8Q9Y5G5 932 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 RPS6KL1Q9Y6S9 549 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 SCN8AQ9UQD0 1980 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 AHCTF1Q8WYP5 2266 aa15.45■□□□□ 0.06
CPSF3-203ENST00000475482 A0A1W2PQM1 296 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 TCRBV9S1A1TA0A576 114 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 RGSL1A5PLK6 1076 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 MPOP05164 745 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 SPINT3P49223 89 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 ERVPABLB-1P60509 514 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 C14orf28Q4W4Y0 310 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 SIRPB2Q5JXA9 342 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 HENMT1Q5T8I9 393 aaKnown RBP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 DENND5AQ6IQ26 1287 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 KDELC2Q7Z4H8 507 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 TMEM135Q86UB9 458 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 AGGF1Q8N302 714 aaeCLIP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 MPP5Q8N3R9 675 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 SLC25A41Q8N5S1 370 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 ATXN7L3BQ96GX2 97 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 ZNF578Q96N58 590 aaPredicted RBP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 WDR83Q9BRX9 315 aaKnown RBP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 RIOK2Q9BVS4 552 aaKnown RBP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 KIFC1Q9BW19 673 aa15.44■□□□□ 0.06
CPSF3-203ENST00000475482 SPATS2LQ9NUQ6 558 aaKnown RBP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 PIH1D1Q9NWS0 290 aaKnown RBP15.44■□□□□ 0.06
CPSF3-203ENST00000475482 LOC400499M0QZD8 3231 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 NUDT21O43809 227 aaKnown RBP15.43■□□□□ 0.06
CPSF3-203ENST00000475482 SYF2O95926 243 aaKnown RBP15.43■□□□□ 0.06
CPSF3-203ENST00000475482 TPH1P17752 444 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 MSH2P43246 934 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 POLD2P49005 469 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 GABREP78334 506 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 CRADDP78560 199 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 OLIG2Q13516 323 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 SPIDRQ14159 915 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 POU6F1Q14863 301 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 CRYMQ14894 314 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 NR1D2Q14995 579 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 PYCR3Q53H96 274 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 LGSNQ5TDP6 509 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 TAOK1Q7L7X3 1001 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 ZNF438Q7Z4V0 828 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 LRRC6Q86X45 466 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 PEX13Q92968 403 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 ZNF669Q96BR6 464 aaPredicted RBP15.43■□□□□ 0.06
CPSF3-203ENST00000475482 ATP6V1G3Q96LB4 118 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 SLC46A1Q96NT5 459 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 GSDMCQ9BYG8 508 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 LRRN3Q9H3W5 708 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 MAGEE1Q9HCI5 957 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 HACD3Q9P035 362 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 VPS18Q9P253 973 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 PSMC3IPQ9P2W1 217 aaPredicted RBP15.43■□□□□ 0.06
CPSF3-203ENST00000475482 NFKBIL1Q9UBC1 381 aaPredicted RBP15.43■□□□□ 0.06
CPSF3-203ENST00000475482 MOSPD1Q9UJG1 213 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms