RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CD274Q9NZQ7 290 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 CCDC167Q9P0B6 97 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 TMEM181Q9P2C4 612 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 CD300AQ9UGN4 299 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 BCAP29Q9UHQ4 241 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 EIF2B4Q9UI10 523 aaKnown RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 PSMD13Q9UNM6 376 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 ERVW-1Q9UQF0 538 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 FNDC3AQ9Y2H6 1198 aaKnown RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 LRCH1Q9Y2L9 728 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 GPR45Q9Y5Y3 372 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 SLC4A7Q9Y6M7 1214 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 PRSS51A0A1B0GVH4 220 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 ATP6AP2A0A1C7CYW4 349 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 OR7A17O14581 309 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 SLC9A3R1O14745 358 aaPredicted RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 MRASO14807 208 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 TAPBPO15533 448 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 HOXC11O43248 304 aaPredicted RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 MAP3K7O43318 606 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 ATP6AP2O75787 350 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 OR4F21O95013 312 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 SLC25A14O95258 325 aaPredicted RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 CHEK2O96017 543 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 SRPRAP08240 638 aaKnown RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 CISD3P0C7P0 127 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 IDO1P14902 403 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 CEBPBP17676 345 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 ZFP36L2P47974 494 aaKnown RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 ERVPABLB-1P60509 514 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 POLR2LP62875 67 aaKnown RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 NTHL1P78549 312 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 CDKL1Q00532 357 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 B4GALNT1Q00973 533 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 MS4A2Q01362 244 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 TRAP1Q12931 704 aaKnown RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 TRAF3Q13114 568 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 PDCD4Q53EL6 469 aaKnown RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 ZFP1Q6P2D0 407 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 TTC23LQ6PF05 361 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 BRAT1Q6PJG6 821 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 PAOXQ6QHF9 649 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 GPRIN3Q6ZVF9 776 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 Q6ZVU0 165 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 FRA10AC1Q70Z53 315 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 GOLGA7Q7Z5G4 137 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 RASGRP3Q8IV61 690 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 MIER2Q8N344 545 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 CHST14Q8NCH0 376 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 TTC16Q8NEE8 873 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 OR9I1Q8NGQ6 314 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 HCAR2Q8TDS4 363 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 SLC26A7Q8TE54 656 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 WFIKKN2Q8TEU8 576 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 GDPD5Q8WTR4 605 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 PYDC1Q8WXC3 89 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 CCDC124Q96CT7 223 aaKnown RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 TUBGCP3Q96CW5 907 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 ASB9Q96DX5 294 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 KLHL32Q96NJ5 620 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 FAM83CQ9BQN1 747 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 HEPHQ9BQS7 1158 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 TMEM79Q9BSE2 394 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 TMEM106CQ9BVX2 250 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 LINC00597Q9H2U6 94 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 ZDHHC6Q9H6R6 413 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 BRD9Q9H8M2 597 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
USP39-214ENST00000474572 BATF3Q9NR55 127 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 KCTD5Q9NXV2 234 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 ABCD2Q9UBJ2 740 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 B4GALT6Q9UBX8 382 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 SLCO3A1Q9UIG8 710 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 CROTQ9UKG9 612 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 TMPRSS11EQ9UL52 423 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 BTRCQ9Y297 605 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 NDUFAF1Q9Y375 327 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 PTGDR2Q9Y5Y4 395 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 PIKFYVEQ9Y2I7 2098 aa9.67□□□□□ -0.86
USP39-214ENST00000474572 C2orf16Q68DN1 1984 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 GRXCR2A6NFK2 248 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 NCF1BA6NI72 391 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 NCF1CA8MVU1 366 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 E7ENX8 843 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 PEX1O43933 1283 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 WDR47O94967 919 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ARHGEF15O94989 841 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 S100BP04271 92 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 ASLP04424 464 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 UGT2B4P06133 528 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 C8BP07358 591 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 LINC00032P0C843 101 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 MPC1LP0DKB6 136 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 CYP2A6P11509 494 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 HGFP14210 728 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 NCF1P14598 390 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 CAPN3P20807 821 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 VIPR1P32241 457 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ERVK-8P63133 956 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 FOXM1Q08050 763 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms