RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 DARS2Q6PI48 645 aaKnown RBP18.22■□□□□ 0.51
COL7A1-209ENST00000474432 TMEM220Q6QAJ8 160 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 PLXDC1Q8IUK5 500 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 OR4K2Q8NGD2 314 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 GPR150Q8NGU9 434 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 RSC1A1Q92681 617 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 EXTL1Q92935 676 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 MED8Q96G25 268 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 ZMYND15Q9H091 742 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 ARNT2Q9HBZ2 717 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 FKBPLQ9UIM3 349 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 PACSIN2Q9UNF0 486 aaPredicted RBP18.22■□□□□ 0.51
COL7A1-209ENST00000474432 PKP3Q9Y446 797 aa18.22■□□□□ 0.51
COL7A1-209ENST00000474432 MACROD2A1Z1Q3 448 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 OR2AG2A6NM03 316 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 KIF1CO43896 1103 aaKnown RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 RAD1O60671 282 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 KCNJ13O60928 360 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 TJP3O95049 919 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 IPO7O95373 1038 aaKnown RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 PRAMEF1O95521 474 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 LIFP15018 202 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 TNNT3P45378 269 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 PPM1FP49593 454 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 ITGA9Q13797 1035 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 GTF2H3Q13889 308 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 NFE2L1Q14494 772 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 SPARCL1Q14515 664 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 KCTD11Q693B1 232 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 AMZ2Q86W34 360 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 BEND7Q8N7W2 519 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 TEFMQ96QE5 360 aaKnown RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 DESI2Q9BSY9 194 aa18.21■□□□□ 0.51
COL7A1-209ENST00000474432 R3HDM2Q9Y2K5 976 aaKnown RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 AAR2Q9Y312 384 aaKnown RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 DNMT3AQ9Y6K1 912 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-209ENST00000474432 TCRBV7S2A1N4TA0A589 114 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 C5orf60A6NFR6 353 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 CAPN5O15484 640 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-209ENST00000474432 SRP72O76094 671 aaKnown RBP18.2■□□□□ 0.5
COL7A1-209ENST00000474432 METTL18O95568 372 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 ITGB2P05107 769 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 ZNF140P52738 457 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-209ENST00000474432 RPE65Q16518 533 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 TBR1Q16650 682 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 METRNLQ641Q3 311 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 TRIM48Q8IWZ4 208 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 CACNA2D3Q8IZS8 1091 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 OR13C4Q8NGS5 318 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 TTC25Q96NG3 672 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 TGM7Q96PF1 710 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 AMFRQ9UKV5 643 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 PSMD13Q9UNM6 376 aa18.2■□□□□ 0.5
COL7A1-209ENST00000474432 TMEM184BQ9Y519 407 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-209ENST00000474432 C2orf81A6NN90 581 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 LDB2O43679 373 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 DLGAP3O95886 979 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 FTCDO95954 541 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 VCLP18206 1134 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 ITGB6P18564 788 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 CAPZBP47756 277 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 ATP1A2P50993 1020 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 PPP1CAP62136 330 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 FNBP1LQ5T0N5 605 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 CEACAM20Q6UY09 585 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 DET1Q7L5Y6 550 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 PEX26Q7Z412 305 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 ZNF605Q86T29 641 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 KIAA1328Q86T90 577 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 RBM12BQ8IXT5 1001 aaKnown RBP18.19■□□□□ 0.5
COL7A1-209ENST00000474432 SLC35B2Q8TB61 432 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 CXorf40BQ96DE9 158 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 HES6Q96HZ4 224 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 ZCCHC2Q9C0B9 1178 aaKnown RBP18.19■□□□□ 0.5
COL7A1-209ENST00000474432 RAB33BQ9H082 229 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 ASB8Q9H765 288 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 SEMA5BQ9P283 1151 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 EPHA6Q9UF33 1036 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 CAPN6Q9Y6Q1 641 aa18.19■□□□□ 0.5
COL7A1-209ENST00000474432 LOC101059948A0A1B0GTJ6 334 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 CCL22O00626 93 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 TOX3O15405 576 aaPredicted RBP18.18■□□□□ 0.5
COL7A1-209ENST00000474432 AMD1P17707 334 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 CDC25BP30305 580 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 GDF10P55107 478 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 SH3BP2P78314 561 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 PRPSAP1Q14558 356 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 PRSS42Q7Z5A4 293 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 IL22RA1Q8N6P7 574 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 KLHL6Q8WZ60 621 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 INSM2Q96T92 566 aaPredicted RBP18.18■□□□□ 0.5
COL7A1-209ENST00000474432 C19orf43Q9BQ61 176 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 TBL1YQ9BQ87 522 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 FERMT1Q9BQL6 677 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 ZPBPQ9BS86 351 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 ZNF768Q9H5H4 540 aaKnown RBP18.18■□□□□ 0.5
COL7A1-209ENST00000474432 BOD1L1Q8NFC6 3051 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 TENM4Q6N022 2769 aa18.18■□□□□ 0.5
COL7A1-209ENST00000474432 MGAT4DA6NG13 374 aa18.17■□□□□ 0.5
COL7A1-209ENST00000474432 MIF4GDA9UHW6 222 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms