RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	PPP2R2B	Q00005	443 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	CDK3	Q00526	305 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	COG2	Q14746	738 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	NFATC4	Q14934	902 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	ARMC3	Q5W041	872 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	FAM198B	Q6UWH4	519 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF34	Q8IZ26	560 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	RNF113B	Q8IZP6	322 aa	Known RBP	4.54	□□□□□ -1.68
BBX-223	ENST00000473542	C1orf87	Q8N0U7	546 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	RBM15B	Q8NDT2	890 aa	Known RBP	4.54	□□□□□ -1.68
BBX-223	ENST00000473542	EXD1	Q8NHP7	514 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	TBC1D16	Q8TBP0	767 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	ELP5	Q8TE02	316 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	PPP4R1	Q8TF05	950 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	ATL1	Q8WXF7	558 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	TANK	Q92844	425 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	VPS33A	Q96AX1	596 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	MIB2	Q96AX9	1013 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	SCMH1	Q96GD3	660 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	C3orf30	Q96M34	536 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	TTC14	Q96N46	770 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	MS4A10	Q96PG2	267 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.54	□□□□□ -1.68
BBX-223	ENST00000473542	SYT17	Q9BSW7	474 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	PRAG1	Q86YV5	1406 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	EDDM13	A0A1B0GTR0	161 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	CYSRT1	A8MQ03	144 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	CCDC188	H7C350	402 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	TMEM189-UBE2V1	I3L0A0	370 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	SLC16A5	O15375	505 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	ZBTB43	O43298	467 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	SSX4	O60224	188 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	TSPAN1	O60635	241 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	ZWINT	O95229	277 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	CLDN14	O95500	239 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	TRUB2	O95900	331 aa	Known RBP	4.53	□□□□□ -1.68
BBX-223	ENST00000473542	LINC00271	P0C7V0	271 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	DAO	P14920	347 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	PFKFB1	P16118	471 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	CORO1A	P31146	461 aa	Known RBP	4.53	□□□□□ -1.68
BBX-223	ENST00000473542	CCKAR	P32238	428 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	EEF1A1	P68104	462 aa	Known RBP	4.53	□□□□□ -1.68
BBX-223	ENST00000473542	UBE2V1	Q13404	147 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	PTPRCAP	Q14761	206 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	HECTD3	Q5T447	861 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	EEF1A1P5	Q5VTE0	462 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	TMEM211	Q6ICI0	200 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF549	Q6P9A3	640 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	TEX38	Q6PEX7	206 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	IL27RA	Q6UWB1	636 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	IQCH	Q86VS3	1027 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	FBXL14	Q8N1E6	418 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	TTC30B	Q8N4P2	665 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	IQCF1	Q8N6M8	205 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	SPATA22	Q8NHS9	363 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	BBS10	Q8TAM1	723 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	WDR20	Q8TBZ3	569 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	ABTB1	Q969K4	478 aa	Predicted RBP	4.53	□□□□□ -1.68
BBX-223	ENST00000473542	ERLEC1	Q96DZ1	483 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	SPATA17	Q96L03	361 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	LRRC3B	Q96PB8	259 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	SEZ6L	Q9BYH1	1024 aa		4.53	□□□□□ -1.68
BBX-223	ENST00000473542	NOL11	Q9H8H0	719 aa	Known RBP	4.53	□□□□□ -1.68
BBX-223	ENST00000473542	OR2M5	A3KFT3	312 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	URAD	A6NGE7	173 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	TSPY2	A6NKD2	308 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	C15orf62	A8K5M9	175 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	T	O15178	435 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	MED24	O75448	989 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	RPN1	P04843	607 aa	Known RBP	4.52	□□□□□ -1.69
BBX-223	ENST00000473542	DANCR	P0C864	163 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	TSPY3	P0CV98	308 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	TSPY8	P0CW00	308 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	FCGR1A	P12314	374 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	GLUL	P15104	373 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	ZNF12	P17014	697 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	ZNF23	P17027	643 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	IFNAR1	P17181	557 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	ERCC2	P18074	760 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	ITGB8	P26012	769 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	TMPO	P42166	694 aa	Known RBP	4.52	□□□□□ -1.69
BBX-223	ENST00000473542	LIMK1	P53667	647 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	TUBA1B	P68363	451 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	TSPY1	Q01534	308 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	DDR1	Q08345	913 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	MYBPH	Q13203	477 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	ZNF234	Q14588	700 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	LETM2	Q2VYF4	491 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	ALDH1L2	Q3SY69	923 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	KRBOX4	Q5JUW0	171 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	PLEKHM3	Q6ZWE6	761 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	ERN2	Q76MJ5	926 aa	Known RBP	4.52	□□□□□ -1.69
BBX-223	ENST00000473542	MAP7D3	Q8IWC1	876 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	THNSL1	Q8IYQ7	743 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	C1orf52	Q8N6N3	182 aa	Known RBP	4.52	□□□□□ -1.69
BBX-223	ENST00000473542	PI4KAP1	Q8N8J0	262 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	OR6J1	Q8NGC5	347 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	MOSPD2	Q8NHP6	518 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	B4GALNT2	Q8NHY0	566 aa		4.52	□□□□□ -1.69
BBX-223	ENST00000473542	TEKT4	Q8WW24	435 aa		4.52	□□□□□ -1.69

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