RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 KLC4Q9NSK0 619 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 PADI4Q9UM07 663 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 DOLKQ9UPQ8 538 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 RNF215Q9Y6U7 377 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 MAST4O15021 2626 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 PRAMEF33A0A0G2JMD5 474 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 FAM149AA5PLN7 773 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 GPR89AB7ZAQ6 455 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 SMAPO00193 183 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 PPM1DO15297 605 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 RAD51CO43502 376 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 OR1I1O60431 355 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 F7P08709 466 aaPredicted RBP12.9□□□□□ -0.34
TPM3-216ENST00000473036 GPR89BP0CG08 455 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 ZNF7P17097 686 aaPredicted RBP12.9□□□□□ -0.34
TPM3-216ENST00000473036 MCM3P25205 808 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 ARCN1P48444 511 aaKnown RBP12.9□□□□□ -0.34
TPM3-216ENST00000473036 CACNG1Q06432 222 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 C14orf28Q4W4Y0 310 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 IGDCC3Q8IVU1 814 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 PPIL6Q8IXY8 311 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 ARL14Q8N4G2 192 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 LILRA3Q8N6C8 439 aaPredicted RBP12.9□□□□□ -0.34
TPM3-216ENST00000473036 CLDN19Q8N6F1 224 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 BBOF1Q8ND07 529 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 PPHLN1Q8NEY8 458 aaKnown RBP12.9□□□□□ -0.34
TPM3-216ENST00000473036 CCDC74AQ96AQ1 378 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 MRM3Q9HC36 420 aaKnown RBP12.9□□□□□ -0.34
TPM3-216ENST00000473036 ZDHHC3Q9NYG2 299 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 IL1RAPL1Q9NZN1 696 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 ASIC3Q9UHC3 531 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 CRLS1Q9UJA2 301 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 DNAJC16Q9Y2G8 782 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 WDR37Q9Y2I8 494 aa12.9□□□□□ -0.34
TPM3-216ENST00000473036 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
TPM3-216ENST00000473036 A0A1W2PQM1 296 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 KMOO15229 486 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 RRP8O43159 456 aaKnown RBP12.89□□□□□ -0.35
TPM3-216ENST00000473036 OPA1O60313 960 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 POP7O75817 140 aaKnown RBP12.89□□□□□ -0.35
TPM3-216ENST00000473036 MLNP12872 115 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 ITGALP20701 1170 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
TPM3-216ENST00000473036 CLCNKAP51800 687 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 LRP8Q14114 963 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 CLCA4Q14CN2 919 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 TRADDQ15628 312 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 GPR33Q49SQ1 333 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 BCL7AQ4VC05 210 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 CDCP2Q5VXM1 449 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 IZUMO3Q5VZ72 239 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 HIBCHQ6NVY1 386 aaPredicted RBP12.89□□□□□ -0.35
TPM3-216ENST00000473036 C8orf74Q6P047 294 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 LRRC69Q6ZNQ3 347 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 TMPRSS9Q7Z410 1059 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 PCGF5Q86SE9 256 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 TRAPPC5Q8IUR0 188 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 SPNS2Q8IVW8 549 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 CACTIN-AS1Q8N1I8 211 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 OR4L1Q8NH43 312 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 SLC37A2Q8TED4 501 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 SCG3Q8WXD2 468 aaKnown RBP12.89□□□□□ -0.35
TPM3-216ENST00000473036 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 SGSM3Q96HU1 749 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 CCDC3Q9BQI4 270 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 TIMM29Q9BSF4 260 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 FAM129AQ9BZQ8 928 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 NRSN2Q9GZP1 204 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 BFARQ9NZS9 450 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 ZNF624Q9P2J8 865 aaPredicted RBP12.89□□□□□ -0.35
TPM3-216ENST00000473036 SLC30A1Q9Y6M5 507 aa12.89□□□□□ -0.35
TPM3-216ENST00000473036 ZCWPW2A0A1B0GU75 182 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 AP3B1O00203 1094 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 B4GAT1O43505 415 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 SNX2O60749 519 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 SEC31AO94979 1220 aaKnown RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 GP1BAP07359 652 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 ATP1B2P14415 290 aaPredicted RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 MSH3P20585 1137 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 RPL10P27635 214 aaKnown RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 AKT1P31749 480 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 EIF2S3P41091 472 aaKnown RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 PDX1P52945 283 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 DRG2P55039 364 aaKnown RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 DHX9Q08211 1270 aaKnown RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 DMPKQ09013 629 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 ILKQ13418 452 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 NFE2L1Q14494 772 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 SEPT7Q16181 437 aaKnown RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 INSCQ1MX18 579 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.88□□□□□ -0.35
TPM3-216ENST00000473036 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 IYDQ6PHW0 289 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 NLRP9Q7RTR0 991 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 TAS2R42Q7RTR8 314 aa12.88□□□□□ -0.35
TPM3-216ENST00000473036 ZNF438Q7Z4V0 828 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms