RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 EID2BQ96D98 161 aa18.58■□□□□ 0.56
SORT1-203ENST00000471996 ANKRD66B4E2M5 251 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 PRSS44E7EML9 344 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 VEGFDO43915 354 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 ZG16O60844 167 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 ZBTB11O95625 1053 aaPredicted RBP18.57■□□□□ 0.56
SORT1-203ENST00000471996 IL1R2P27930 398 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 HALP42357 657 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 SMTNL2Q2TAL5 461 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 FKBP15Q5T1M5 1219 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 TMTC4Q5T4D3 741 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 ALS2CLQ60I27 953 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 PDPK2PQ6A1A2 396 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 FAM198BQ6UWH4 519 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 Q6ZS92 163 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 RAB43Q86YS6 212 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 TRAM1L1Q8N609 369 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 GPR150Q8NGU9 434 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 MAML1Q92585 1016 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 NUP85Q9BW27 656 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 OSGIN2Q9Y236 505 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 TTLL3Q9Y4R7 772 aa18.57■□□□□ 0.56
SORT1-203ENST00000471996 OR5K3A6NET4 321 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 MTX2O75431 263 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 CDK14O94921 469 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 VCLP18206 1134 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 CA5AP35218 305 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 PCK1P35558 622 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 DCDC1P59894 354 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 NIPAL4Q0D2K0 466 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 MYBPC3Q14896 1274 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 BOLA3Q53S33 107 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 PPP1R2P3Q6NXS1 205 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 C11orf96Q7Z7L8 435 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 CUZD1Q86UP6 607 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 KCNMB4Q86W47 210 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 TM9SF4Q92544 642 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 HSPH1Q92598 858 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 CLIP3Q96DZ5 547 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 ZNF552Q9H707 407 aaPredicted RBP18.56■□□□□ 0.56
SORT1-203ENST00000471996 PCMTD2Q9NV79 361 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 RBM22Q9NW64 420 aaKnown RBP eCLIP18.56■□□□□ 0.56
SORT1-203ENST00000471996 AMACRQ9UHK6 382 aa18.56■□□□□ 0.56
SORT1-203ENST00000471996 PCSK5Q92824 1860 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 TMCO5BA8MYB1 307 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 MATN3O15232 486 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 KLHL41O60662 606 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 ZNF165P49910 485 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 ABRQ12979 859 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 NCF4Q15080 339 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 PLCL1Q15111 1095 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 KRT31Q15323 416 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 KHDC1Q4VXA5 237 aaKnown RBP18.55■□□□□ 0.56
SORT1-203ENST00000471996 HGSNATQ68CP4 663 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 SYTL1Q8IYJ3 562 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 TTC30BQ8N4P2 665 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 ZADH2Q8N4Q0 377 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 NEK11Q8NG66 645 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 FER1L6-AS2Q96M78 137 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 IP6K3Q96PC2 410 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 ZFYVE1Q9HBF4 777 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.55■□□□□ 0.56
SORT1-203ENST00000471996 HAUS2Q9NVX0 235 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 HRASLS2Q9NWW9 162 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 NFKBIL1Q9UBC1 381 aaPredicted RBP18.55■□□□□ 0.56
SORT1-203ENST00000471996 BTRCQ9Y297 605 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 CELSR1Q9NYQ6 3014 aa18.55■□□□□ 0.56
SORT1-203ENST00000471996 SETD2Q9BYW2 2564 aaPredicted RBP18.54■□□□□ 0.56
SORT1-203ENST00000471996 IPO13O94829 963 aaKnown RBP18.54■□□□□ 0.56
SORT1-203ENST00000471996 LLGL1Q15334 1064 aa18.54■□□□□ 0.56
SORT1-203ENST00000471996 RPE65Q16518 533 aa18.54■□□□□ 0.56
SORT1-203ENST00000471996 MRGPREQ86SM8 312 aa18.54■□□□□ 0.56
SORT1-203ENST00000471996 CARFQ8N187 725 aa18.54■□□□□ 0.56
SORT1-203ENST00000471996 GALNT16Q8N428 558 aa18.54■□□□□ 0.56
SORT1-203ENST00000471996 CLEC1AQ8NC01 280 aa18.54■□□□□ 0.56
SORT1-203ENST00000471996 RAD18Q9NS91 495 aa18.54■□□□□ 0.56
SORT1-203ENST00000471996 E2F3O00716 465 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 KCNJ13O60928 360 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 TPM2P07951 284 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 RARAP10276 462 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 TCF4P15884 667 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 OTX2P32243 289 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 GALNT2Q10471 571 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 TIGD7Q6NT04 549 aaPredicted RBP18.53■□□□□ 0.56
SORT1-203ENST00000471996 SPOCD1Q6ZMY3 1216 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 TRAPPC5Q8IUR0 188 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 FATE1Q969F0 183 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 LURAP1Q96LR2 239 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 SYT11Q9BT88 431 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 TLR10Q9BXR5 811 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 ADGRE3Q9BY15 652 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 ACTR5Q9H9F9 607 aaPredicted RBP18.53■□□□□ 0.56
SORT1-203ENST00000471996 FANCEQ9HB96 536 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 ZBTB20Q9HC78 741 aaPredicted RBP18.53■□□□□ 0.56
SORT1-203ENST00000471996 PCDH18Q9HCL0 1135 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 SOHLH2Q9NX45 425 aa18.53■□□□□ 0.56
SORT1-203ENST00000471996 DIDO1Q9BTC0 2240 aaKnown RBP18.52■□□□□ 0.56
SORT1-203ENST00000471996 LCA5LO95447 670 aa18.52■□□□□ 0.56
SORT1-203ENST00000471996 HLA-DQB2P05538 268 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms