RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CIARTQ8N365 385 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 PI4KAP1Q8N8J0 262 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 CADM4Q8NFZ8 388 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 THAP6Q8TBB0 222 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 HTRA1Q92743 480 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 PIGTQ969N2 578 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 RNF125Q96EQ8 232 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 QRFPRQ96P65 431 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 CMKLR1Q99788 373 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 TMEM47Q9BQJ4 181 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 RANBP17Q9H2T7 1088 aaKnown RBP5.34□□□□□ -1.55
CCDC39-202ENST00000471307 TAAR2Q9P1P5 351 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 GJD2Q9UKL4 321 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 DLGAP4Q9Y2H0 992 aa5.34□□□□□ -1.55
CCDC39-202ENST00000471307 LAMB4A4D0S4 1761 aa5.34□□□□□ -1.56
CCDC39-202ENST00000471307 C5P01031 1676 aa5.34□□□□□ -1.56
CCDC39-202ENST00000471307 RRN3P2A6NIE6 340 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 TNFSF14O43557 240 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 PAK4O96013 591 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 F9P00740 461 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 MYOD1P15172 320 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 XBP1P17861 261 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 CRKLP46109 303 aaKnown RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 MMP14P50281 582 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 EIF5P55010 431 aaKnown RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 NEXNQ0ZGT2 675 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 AIMP1Q12904 312 aaKnown RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 ITPK1Q13572 414 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 FGFBP1Q14512 234 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 GPATCH4Q5T3I0 446 aaKnown RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 SIGIRRQ6IA17 410 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 DUS1LQ6P1R4 473 aaKnown RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 ASB18Q6ZVZ8 466 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 ITPRIPQ8IWB1 547 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 PCDH20Q8N6Y1 951 aaKnown RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 EXOC6Q8TAG9 804 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 DNAAF4Q8WXU2 420 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 LTB4R2Q9NPC1 389 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 WASH6PQ9NQA3 447 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 SLC6A13Q9NSD5 602 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 CYP46A1Q9Y6A2 500 aa5.33□□□□□ -1.56
CCDC39-202ENST00000471307 CICQ96RK0 1608 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-202ENST00000471307 IBTKQ9P2D0 1353 aaPredicted RBP5.32□□□□□ -1.56
CCDC39-202ENST00000471307 LY75O60449 1722 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 EP400Q96L91 3159 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 CYSRT1A8MQ03 144 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 ERVV-1B6SEH8 477 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 SPINT2O43291 252 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 HSP90AA1P07900 732 aaKnown RBP5.32□□□□□ -1.56
CCDC39-202ENST00000471307 GM2AP17900 193 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 PIP4K2AP48426 406 aaPredicted RBP5.32□□□□□ -1.56
CCDC39-202ENST00000471307 GTF2H2Q13888 395 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 BEND3Q5T5X7 828 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 TTI2Q6NXR4 508 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 GTF2H2CQ6P1K8 395 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 KIF6Q6ZMV9 814 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 NEURL2Q9BR09 285 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 MAF1Q9H063 256 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 FAM118AQ9NWS6 357 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 HCFC1R1Q9NWW0 138 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 HAO1Q9UJM8 370 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 TNNQ9UQP3 1299 aa5.32□□□□□ -1.56
CCDC39-202ENST00000471307 MYH14Q7Z406 1995 aaKnown RBP5.32□□□□□ -1.56
CCDC39-202ENST00000471307 TJP1Q07157 1748 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 ADCY9O60503 1353 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 MAP3K15Q6ZN16 1313 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 EDIL3O43854 480 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 CFC1BP0CG36 223 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 CFC1P0CG37 223 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 PAX1P15863 534 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 MAPK9P45984 424 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 GRIK2Q13002 908 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 OLIG2Q13516 323 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 DECR1Q16698 335 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 HSP90AB3PQ58FF7 597 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 FAM69AQ5T7M9 428 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 WDR78Q5VTH9 848 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 CLEC4GQ6UXB4 293 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 GSTA5Q7RTV2 222 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 KLHDC8BQ8IXV7 354 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 SLC24A4Q8NFF2 622 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 GRAPLQ8TC17 118 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-202ENST00000471307 ST8SIA4Q92187 359 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 TAAR8Q969N4 342 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 ORAI1Q96D31 301 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 HARBI1Q96MB7 349 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 ZNF583Q96ND8 569 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 NR1H4Q96RI1 486 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-202ENST00000471307 ACSL5Q9ULC5 683 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 OR2W1Q9Y3N9 320 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 PXDNLA1KZ92 1463 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 COL5A3P25940 1745 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-202ENST00000471307 ATP10DQ9P241 1426 aa5.31□□□□□ -1.56
CCDC39-202ENST00000471307 TAF1LQ8IZX4 1826 aa5.3□□□□□ -1.56
CCDC39-202ENST00000471307 IFNL4K9M1U5 179 aa5.3□□□□□ -1.56
CCDC39-202ENST00000471307 DVL1O14640 695 aa5.3□□□□□ -1.56
CCDC39-202ENST00000471307 EGFP01133 1207 aa5.3□□□□□ -1.56
CCDC39-202ENST00000471307 IGKV5-2P06315 115 aa5.3□□□□□ -1.56
CCDC39-202ENST00000471307 PRSS1P07477 247 aa5.3□□□□□ -1.56
CCDC39-202ENST00000471307 CTCFP49711 727 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms