RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 GPR34Q9UPC5 381 aa13.49□□□□□ -0.25
LINC00173-201ENST00000470091 SPO11Q9Y5K1 396 aa13.49□□□□□ -0.25
LINC00173-201ENST00000470091 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 HEATR9A2RTY3 570 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 FOXO6A8MYZ6 492 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 HMGB1P1B2RPK0 211 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 POLR3GO15318 223 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 UGT1A9O60656 530 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 PGLSO95336 258 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 ERVK-10P10266 1014 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 ADRA1DP25100 572 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 HTR1BP28222 390 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 MSH2P43246 934 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 SUOXP51687 545 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 UCNP55089 124 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 CCL7P80098 99 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 BCL2L1Q07817 233 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 MGAT5Q09328 741 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 FRG1Q14331 258 aaKnown RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 QPCTQ16769 361 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 TSTD2Q5T7W7 516 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 ARMC12Q5T9G4 340 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 MICALCLQ6ZW33 695 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 CYP4X1Q8N118 509 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 SDR16C5Q8N3Y7 309 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 RIBC1Q8N443 379 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 FSTL5Q8N475 847 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 ARL14Q8N4G2 192 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 Q8N9G6 341 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 KYQ8NBH2 561 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 WDR36Q8NI36 951 aaKnown RBP13.48□□□□□ -0.25
LINC00173-201ENST00000470091 SLC44A1Q8WWI5 657 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 CCDC74AQ96AQ1 378 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 PGM2Q96G03 612 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 ATP13A3Q9H7F0 1226 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 PPCSQ9HAB8 311 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 UGT1A7Q9HAW7 530 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 UGT1A10Q9HAW8 530 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 UGT1A8Q9HAW9 530 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 VPS18Q9P253 973 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 FETUBQ9UGM5 382 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 KCTD3Q9Y597 815 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 FAM169AQ9Y6X4 670 aa13.48□□□□□ -0.25
LINC00173-201ENST00000470091 TOR1BO14657 336 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 HTRA2O43464 458 aaPredicted RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 FZD6O60353 706 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 SOCS5O75159 536 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 FAM155BO75949 473 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 RASGRP1O95267 797 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 TNFP01375 233 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 SLC4A1P02730 911 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 INHBAP08476 426 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 ALPIP09923 528 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 SERPINA4P29622 427 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 MAGOHP61326 146 aaKnown RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 VAC14Q08AM6 782 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 LY6DQ14210 128 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 NFATC4Q14934 902 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 PTPRRQ15256 657 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 MARK2Q7KZI7 788 aaKnown RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 B3GNT8Q7Z7M8 397 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 GKN2Q86XP6 184 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 ARL10Q8N8L6 244 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 FAM46DQ8NEK8 389 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 HCAR2Q8TDS4 363 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 TBATAQ96M53 351 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 ZNF641Q96N77 438 aaPredicted RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 ADGRE3Q9BY15 652 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 STMN4Q9H169 189 aaPredicted RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 TREX1Q9NSU2 369 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 C20orf96Q9NUD7 363 aaPredicted RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
LINC00173-201ENST00000470091 ASH1LQ9NR48 2969 aaKnown RBP13.47□□□□□ -0.25
LINC00173-201ENST00000470091 AHCTF1Q8WYP5 2266 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 CCDC187A0A096LP49 1063 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 TMEM202A6NGA9 273 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 MROH6A6NGR9 719 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 GOLGA8TH3BQL2 631 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 ERVH48-1M5A8F1 160 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 CCL22O00626 93 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 TRAFD1O14545 582 aaPredicted RBP13.46□□□□□ -0.25
LINC00173-201ENST00000470091 LDB2O43679 373 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 BUD23O43709 281 aaKnown RBP13.46□□□□□ -0.25
LINC00173-201ENST00000470091 RPLP0P05388 317 aaKnown RBP13.46□□□□□ -0.25
LINC00173-201ENST00000470091 F7P08709 466 aaPredicted RBP13.46□□□□□ -0.25
LINC00173-201ENST00000470091 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 CTPS1P17812 591 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 ARNTP27540 789 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 EPHB1P54762 984 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 RHDQ02161 417 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 NAB1Q13506 487 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 GRM3Q14832 879 aa13.46□□□□□ -0.25
LINC00173-201ENST00000470091 CNGA3Q16281 694 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms