RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	PRMT5	O14744	637 aa	Predicted RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	CHUK	O15111	745 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	KMO	O15229	486 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	YKT6	O15498	198 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	FFAR2	O15552	330 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	AQP9	O43315	295 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	PIAS1	O75925	651 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	PIAS2	O75928	621 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	CELA2B	P08218	269 aa	Predicted RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	GPR89B	P0CG08	455 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	ITGB6	P18564	788 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	MCM3	P25205	808 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	AK4	P27144	223 aa	Predicted RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	TNFRSF8	P28908	595 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	FMO4	P31512	558 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	PHB	P35232	272 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	SLC1A2	P43004	574 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	RXRG	P48443	463 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	PMS2	P54278	862 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	MPP1	Q00013	466 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	ILF3	Q12906	894 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	ELOC	Q15369	112 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	SHB	Q15464	509 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	TEDDM1	Q5T9Z0	273 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	RNF187	Q5TA31	235 aa	Predicted RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	PTRHD1	Q6GMV3	140 aa	Known RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	CTAGE3P	Q8IX95	158 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	LMNTD2	Q8IXW0	634 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	EIF1AD	Q8N9N8	165 aa	Known RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	CCL4L1	Q8NHW4	92 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	UHMK1	Q8TAS1	419 aa	Known RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	FBF1	Q8TES7	1133 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	CDKL2	Q92772	493 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	GATA6	Q92908	595 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	SCARF2	Q96GP6	870 aa	Predicted RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	ZNF514	Q96K75	400 aa	Predicted RBP	13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	TCF12	Q99081	682 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	LRRC61	Q9BV99	259 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	SCNM1	Q9BWG6	230 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	OSGEPL1	Q9H4B0	414 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	KLC4	Q9NSK0	619 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	UCKL1	Q9NWZ5	548 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	MOCS1	Q9NZB8	636 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	KCNK6	Q9Y257	313 aa		13.44	□□□□□ -0.26
LMNA-210	ENST00000469565	IGLV3-16	A0A075B6K0	115 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	TCRBV9S1A1T	A0A576	114 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565		F8W8V4	182 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	CDX4	O14627	284 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	SPAG6	O75602	509 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	POP7	O75817	140 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	HAUS5	O94927	633 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	TRIM16	O95361	564 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	S1PR4	O95977	384 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ANXA6	P08133	673 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	OR56A5	P0C7T3	313 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	DGKA	P23743	735 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	EPHA8	P29322	1005 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	STX2	P32856	288 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ACTR1B	P42025	376 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ACTR1A	P61163	376 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	CTBS	Q01459	385 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	SUZ12	Q15022	739 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	TYSND1	Q2T9J0	566 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ZNF789	Q5FWF6	425 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	CNST	Q6PJW8	725 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	SLC30A9	Q6PML9	568 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	PACS1	Q6VY07	963 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	GKN2	Q86XP6	184 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	RELL1	Q8IUW5	271 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ZNF547	Q8IVP9	402 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	MRRF	Q96E11	262 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	GSDMC	Q9BYG8	508 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	CCDC68	Q9H2F9	335 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	GPR34	Q9UPC5	381 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	VPS9D1	Q9Y2B5	631 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	ZZEF1	O43149	2961 aa		13.43	□□□□□ -0.26
LMNA-210	ENST00000469565	WDFY3	Q8IZQ1	3526 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	NEMP2	A6NFY4	417 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	IQCF5	A8MTL0	148 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	QSOX1	O00391	747 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	SNX2	O60749	519 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	AP2A2	O94973	939 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	TOP3B	O95985	862 aa	Known RBP	13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	VCL	P18206	1134 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	CSRP1	P21291	193 aa	Known RBP	13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	ABCG1	P45844	678 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	PRLHR	P49683	370 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	FRG1	Q14331	258 aa	Known RBP	13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	BRD3	Q15059	726 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	DEFB133	Q30KQ1	61 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	KBTBD12	Q3ZCT8	623 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	BCL7A	Q4VC05	210 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	UBAP2	Q5T6F2	1119 aa	Known RBP	13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	WDR93	Q6P2C0	686 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	AMZ2	Q86W34	360 aa		13.42	□□□□□ -0.26
LMNA-210	ENST00000469565	KRT222	Q8N1A0	295 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms