RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 DTLQ9NZJ0 730 aa5.2□□□□□ -1.58
PTPN4-209ENST00000469511 ZNF624Q9P2J8 865 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-209ENST00000469511 UBA2Q9UBT2 640 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-209ENST00000469511 USP25Q9UHP3 1055 aa5.2□□□□□ -1.58
PTPN4-209ENST00000469511 ADAM30Q9UKF2 790 aa5.2□□□□□ -1.58
PTPN4-209ENST00000469511 PPT2Q9UMR5 302 aa5.2□□□□□ -1.58
PTPN4-209ENST00000469511 FARSAQ9Y285 508 aaKnown RBP5.2□□□□□ -1.58
PTPN4-209ENST00000469511 HIF3AQ9Y2N7 669 aa5.2□□□□□ -1.58
PTPN4-209ENST00000469511 COPG1Q9Y678 874 aaKnown RBP5.2□□□□□ -1.58
PTPN4-209ENST00000469511 IGHV5-51A0A0C4DH38 117 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CCDC78A2IDD5 438 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 FAM181BA6NEQ2 426 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 NPIPB15A6NHN6 443 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 P4HA2O15460 535 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ZW10O43264 779 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CREB3O43889 395 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 WISP2O76076 250 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 STK10O94804 968 aaKnown RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 HTR3BO95264 441 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ASMTLO95671 621 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CAPN1P07384 714 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ANKRD34CP0C6C1 535 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 EBLN1P0CF75 366 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 LPOP22079 712 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CDH5P33151 784 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 MAN1A1P33908 653 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 NTF4P34130 210 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 GPR1P46091 355 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 PAPOLAP51003 745 aaKnown RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 SCNN1BP51168 640 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 UBE2IP63279 158 aaKnown RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 TRAF2Q12933 501 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ATP1A4Q13733 1029 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 LLGL1Q15334 1064 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 TMEM201Q5SNT2 666 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 FAM182AQ5T1J6 154 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ZNF658Q5TYW1 1059 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CACHD1Q5VU97 1274 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 KLHL10Q6JEL2 608 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 FDX2Q6P4F2 183 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 FBXO38Q6PIJ6 1188 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 SPOCD1Q6ZMY3 1216 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 RHOT1Q8IXI2 618 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 IQCKQ8N0W5 287 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 PGBD5Q8N414 524 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 C2CD4AQ8NCU7 369 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 RNF214Q8ND24 703 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 UBE2Q2Q8WVN8 375 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ITLN2Q8WWU7 325 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CPA5Q8WXQ8 436 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 THAP4Q8WY91 577 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 KLHL6Q8WZ60 621 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 PPM1MQ96MI6 270 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 FERD3LQ96RJ6 166 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 WDR24Q96S15 920 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 TSG101Q99816 390 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 MLPHQ9BV36 600 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CEP41Q9BYV8 373 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 WNT10AQ9GZT5 417 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 LRRC19Q9H756 370 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 GPATCH2LQ9NWQ4 482 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CPNE7Q9UBL6 633 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 SLC23A2Q9UGH3 650 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ZNHIT2Q9UHR6 403 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 CNOT6Q9ULM6 557 aaKnown RBP5.19□□□□□ -1.58
PTPN4-209ENST00000469511 SIK3Q9Y2K2 1263 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 ZDHHC9Q9Y397 364 aa5.19□□□□□ -1.58
PTPN4-209ENST00000469511 PRAMEF27A3QJZ7 478 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 C2CD4BA6NLJ0 364 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 WASH4PA8MWX3 477 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 C21orf140B9A014 251 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 PRAMEF11O60813 436 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 LRCH4O75427 683 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 RASSF9O75901 435 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 LCA5LO95447 670 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 NADKO95544 446 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-209ENST00000469511 MMEP08473 750 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 PDHA1P08559 390 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 ACP5P13686 325 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 DRD2P14416 443 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 BRAFP15056 766 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 NELFEP18615 380 aaKnown RBP5.18□□□□□ -1.58
PTPN4-209ENST00000469511 PON1P27169 355 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 EPHB2P29323 1055 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 SERPINA4P29622 427 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 VIPR1P32241 457 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 KRT9P35527 623 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 YBEYP58557 167 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-209ENST00000469511 MAXP61244 160 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 LRRC63Q05C16 580 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 BCL2L1Q07817 233 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 SLC10A7Q0GE19 358 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 IL11RAQ14626 422 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 GPR19Q15760 415 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 KYNUQ16719 465 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 CA9Q16790 459 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 COBLL1Q53SF7 1204 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 PLEKHS1Q5SXH7 462 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 CFAP58Q5T655 872 aa5.18□□□□□ -1.58
PTPN4-209ENST00000469511 SPNS3Q6ZMD2 512 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms