RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 KCNJ2P63252 427 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 ELF3P78545 371 aaPredicted RBP9.21□□□□□ -0.94
SMC1A-205ENST00000469129 ARHGAP8P85298 464 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 CLCQ05315 142 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 RIPK1Q13546 671 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 UBAP2LQ14157 1087 aaKnown RBP9.21□□□□□ -0.94
SMC1A-205ENST00000469129 ADGRE1Q14246 886 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 HERC3Q15034 1050 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 PCBP2Q15366 365 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMC1A-205ENST00000469129 MAPRE2Q15555 327 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TGFBIQ15582 683 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 RBBP7Q16576 425 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 LSM12Q3MHD2 195 aaKnown RBP9.21□□□□□ -0.94
SMC1A-205ENST00000469129 CDKL4Q5MAI5 379 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 PLEKHS1Q5SXH7 462 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 C9orf64Q5T6V5 341 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 VWA5B1Q5TIE3 1220 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 KANK2Q63ZY3 851 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 NXNQ6DKJ4 435 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 CYB5D1Q6P9G0 228 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TTC23LQ6PF05 361 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 SBSNQ6UWP8 590 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 LIPIQ6XZB0 460 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 NEK10Q6ZWH5 1172 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 HSD11B1LQ7Z5J1 315 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TECPR1Q7Z6L1 1165 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TMPRSS6Q8IU80 811 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 CLYBLQ8N0X4 340 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TCAIMQ8N3R3 496 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 KIF2BQ8N4N8 673 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TEX9Q8N6V9 391 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 ZNF366Q8N895 744 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 MAPK15Q8TD08 544 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 LKAAEAR1Q8TD35 194 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 CSGALNACT1Q8TDX6 532 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 AGAP11Q8TF27 550 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 ZNF483Q8TF39 744 aaPredicted RBP9.21□□□□□ -0.94
SMC1A-205ENST00000469129 AP2M1Q96CW1 435 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 SLC7A6OSQ96CW6 309 aaPredicted RBP9.21□□□□□ -0.94
SMC1A-205ENST00000469129 NUS1Q96E22 293 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 DTD2Q96FN9 168 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 PRR11Q96HE9 360 aaPredicted RBP9.21□□□□□ -0.94
SMC1A-205ENST00000469129 CCT7Q99832 543 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TRIM54Q9BYV2 358 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 SHCBP1LQ9BZQ2 653 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 ZMYND15Q9H091 742 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 C1orf21Q9H246 121 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 MTG2Q9H4K7 406 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 FBRSQ9HAH7 460 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 RDH14Q9HBH5 336 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 MID1IP1Q9NPA3 183 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 NDE1Q9NXR1 346 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 GALPQ9UBC7 116 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 PCTPQ9UKL6 214 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 PPM1HQ9ULR3 514 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 TRAF6Q9Y4K3 522 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 PRSS21Q9Y6M0 314 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 NUMBLQ9Y6R0 609 aa9.21□□□□□ -0.94
SMC1A-205ENST00000469129 PRRC2BQ5JSZ5 2229 aaKnown RBP9.2□□□□□ -0.94
SMC1A-205ENST00000469129 OTOL1A6NHN0 477 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-205ENST00000469129 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-205ENST00000469129 IQCF5A8MTL0 148 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-205ENST00000469129 SDHDO14521 159 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 SLC16A5O15375 505 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 FFAR2O15552 330 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 DCXO43602 365 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 NUAK1O60285 661 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 WFS1O76024 890 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 SIX3O95343 332 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-205ENST00000469129 EPHX1P07099 455 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 KRT16P08779 473 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 GSTM1P09488 218 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 BMP1P13497 986 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 HLA-EP13747 358 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 NCF1P14598 390 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-205ENST00000469129 ITGB6P18564 788 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 EPHA3P29320 983 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 ETV3P41162 512 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 TNFRSF4P43489 277 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 KCNC1P48547 511 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 PSMD8P48556 350 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 ATP4BP51164 291 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 CCR3P51677 355 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 STX1BP61266 288 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 CDKL1Q00532 357 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 SEMG2Q02383 582 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 GSTM4Q03013 218 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 BTKQ06187 659 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 SQLEQ14534 574 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 PPP1R3AQ16821 1122 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 TMEM52BQ4KMG9 183 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 SYTL3Q4VX76 610 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 C6orf163Q5TEZ5 329 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 SULT1C3Q6IMI6 304 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 Q6ZVL8 140 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 ERN2Q76MJ5 926 aaKnown RBP9.2□□□□□ -0.94
SMC1A-205ENST00000469129 TREML1Q86YW5 311 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
SMC1A-205ENST00000469129 CPSF7Q8N684 471 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms