RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 UNC79Q9P2D8 2635 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 SPENQ96T58 3664 aaKnown RBP16.91■□□□□ 0.3
TRIM56-203ENST00000467847 IGHV5-51A0A0C4DH38 117 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 LOC285095A0A1B0GVY8 99 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 PIPSLA2A3N6 862 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 POP7O75817 140 aaKnown RBP16.91■□□□□ 0.3
TRIM56-203ENST00000467847 TIAF1O95411 115 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 NFKB1P19838 968 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 NR1D1P20393 614 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 CD68P34810 354 aaPredicted RBP16.91■□□□□ 0.3
TRIM56-203ENST00000467847 CDKN2BP42772 138 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 SLC1A1P43005 524 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 WASHC5Q12768 1159 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 TUBB3Q13509 450 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 DNASE1L3Q13609 305 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 CHRNA6Q15825 494 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 LDLRAP1Q5SW96 308 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 KDELC1Q6UW63 502 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 TMEM135Q86UB9 458 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 TTC30BQ8N4P2 665 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 RASGEF1AQ8N9B8 481 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 SIDT2Q8NBJ9 832 aaKnown RBP16.91■□□□□ 0.3
TRIM56-203ENST00000467847 GPR150Q8NGU9 434 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 CT55Q8WUE5 264 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 UBXN4Q92575 508 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 CCDC42Q96M95 316 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 CHP1Q99653 195 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 ABHD10Q9NUJ1 306 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRIM56-203ENST00000467847 PSMD13Q9UNM6 376 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 PLAAQ9Y263 795 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 PCDHGA6Q9Y5G7 932 aa16.91■□□□□ 0.3
TRIM56-203ENST00000467847 RP1L1Q8IWN7 2480 aaPredicted RBP16.9■□□□□ 0.3
TRIM56-203ENST00000467847 GLYATL1P3A0A0U1RQE8 302 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 OR2AG2A6NM03 316 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 C21orf140B9A014 251 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 F5H423 210 aaPredicted RBP16.9■□□□□ 0.3
TRIM56-203ENST00000467847 K7EM74 188 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 GPR39O43194 453 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 MTSS1O43312 755 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 SPOPO43791 374 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 UGT1A9O60656 530 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 CST8O60676 142 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 CREG1O75629 220 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 RFPL1O75677 317 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 EPOP01588 193 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 TPM1P09493 284 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 FOLR1P15328 257 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 PECAM1P16284 738 aaPredicted RBP16.9■□□□□ 0.3
TRIM56-203ENST00000467847 UGT1A6P19224 532 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 UGT1A1P22309 533 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 UGT1A4P22310 534 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 CHRNA4P43681 627 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 CTSCP53634 463 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 DMPKQ09013 629 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 TFDP2Q14188 446 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 KCNAB1Q14722 419 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 PLCL1Q15111 1095 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 RPE65Q16518 533 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 KAZNQ674X7 775 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 PWWP2BQ6NUJ5 590 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 TCTN3Q6NUS6 607 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 FAM83HQ6ZRV2 1179 aaPredicted RBP16.9■□□□□ 0.3
TRIM56-203ENST00000467847 GLT6D1Q7Z4J2 308 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 TEX19Q8NA77 164 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 DTX3LQ8TDB6 740 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 BLOC1S5Q8TDH9 187 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 SLC41A2Q96JW4 573 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
TRIM56-203ENST00000467847 UGT1A7Q9HAW7 530 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 UGT1A10Q9HAW8 530 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 UGT1A8Q9HAW9 530 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 LHX9Q9NQ69 397 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 HACD3Q9P035 362 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 IL17CQ9P0M4 197 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 SEMA5BQ9P283 1151 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 KLHL8Q9P2G9 620 aaPredicted RBP16.9■□□□□ 0.3
TRIM56-203ENST00000467847 RARRES3Q9UL19 164 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 MAN2B2Q9Y2E5 1009 aa16.9■□□□□ 0.3
TRIM56-203ENST00000467847 USP9YO00507 2555 aaPredicted RBP16.9■□□□□ 0.3
TRIM56-203ENST00000467847 CBFA2T2O43439 604 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 BUD23O43709 281 aaKnown RBP16.89■□□□□ 0.29
TRIM56-203ENST00000467847 COMTP21964 271 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 PBLDP30039 288 aaPredicted RBP16.89■□□□□ 0.29
TRIM56-203ENST00000467847 ARL4DP49703 201 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 PMS2P54278 862 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 ITGA9Q13797 1035 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 NFE2L1Q14494 772 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 LLGL1Q15334 1064 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 SLC1A5Q15758 541 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 TMEM220Q6QAJ8 160 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 ASB18Q6ZVZ8 466 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 ZC3H18Q86VM9 953 aaKnown RBP16.89■□□□□ 0.29
TRIM56-203ENST00000467847 FAM26EQ8N5C1 309 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 DDHD1Q8NEL9 900 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 IPMKQ8NFU5 416 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 P3H4Q92791 437 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 MRGPRX2Q96LB1 330 aa16.89■□□□□ 0.29
TRIM56-203ENST00000467847 ACTL8Q9H568 366 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms