RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 PRR35P0CG20 571 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 RPS3P23396 243 aaKnown RBP eCLIP11.28□□□□□ -0.6
HPS1-208ENST00000467246 MYLK3Q32MK0 819 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 XKR7Q5GH72 579 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 LRRC73Q5JTD7 316 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 IL23RQ5VWK5 629 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 OR52E8Q6IFG1 317 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 CYP2R1Q6VVX0 501 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 HACD2Q6Y1H2 254 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 DLG3Q92796 817 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 LRGUKQ96M69 825 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 HBEGFQ99075 208 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 C1orf50Q9BV19 199 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 NSUN3Q9H649 340 aaKnown RBP11.28□□□□□ -0.6
HPS1-208ENST00000467246 NUDT4Q9NZJ9 180 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 GNPTGQ9UJJ9 305 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 SLC4A7Q9Y6M7 1214 aa11.28□□□□□ -0.6
HPS1-208ENST00000467246 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 GIPC1O14908 333 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 FFAR2O15552 330 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.61
HPS1-208ENST00000467246 IDO1P14902 403 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 SPAM1P38567 509 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 SNRPD1P62314 119 aaKnown RBP11.27□□□□□ -0.61
HPS1-208ENST00000467246 ROR2Q01974 943 aaKnown RBP11.27□□□□□ -0.61
HPS1-208ENST00000467246 ADGRE1Q14246 886 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 CAPRIN1Q14444 709 aaKnown RBP11.27□□□□□ -0.61
HPS1-208ENST00000467246 GSTA3Q16772 222 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 LRRC66Q68CR7 880 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 OGFOD2Q6N063 350 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 ADAMTSL2Q86TH1 951 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 ADGRG2Q8IZP9 1017 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 GALNT15Q8N3T1 639 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 TMEM199Q8N511 208 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 PCYOX1LQ8NBM8 494 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 ZNF382Q96SR6 550 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 NUSAP1Q9BXS6 441 aaKnown RBP11.27□□□□□ -0.61
HPS1-208ENST00000467246 TRIM8Q9BZR9 551 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 SLC52A3Q9NQ40 469 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 ELOVL2Q9NXB9 296 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 DTNAQ9Y4J8 743 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 CDH23Q9H251 3354 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 CARNS1A5YM72 827 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 MAGEA13PA6NCF6 341 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 NEDD8-MDP1E9PL57 170 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 KIAA0355O15063 1070 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 ANGPT2O15123 496 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 PEX1O43933 1283 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 VPS4BO75351 444 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 KATNA1O75449 491 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 MATN4O95460 622 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 CHEK2O96017 543 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 LYNP07948 512 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 UQCRBP14927 111 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 VCLP18206 1134 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 LHCGRP22888 699 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 HTR6P50406 440 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 PHKG1Q16816 387 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 C6orf10Q5SRN2 563 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 C22orf39Q6P5X5 142 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 BLOC1S3Q6QNY0 202 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 DPY19L3Q6ZPD9 716 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 Q6ZSR9 355 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 GOLGA7Q7Z5G4 137 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 NXPE1Q8N323 547 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 VPS33AQ96AX1 596 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 ROPN1LQ96C74 230 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 SCRN2Q96FV2 425 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 NR1H4Q96RI1 486 aaPredicted RBP11.27□□□□□ -0.61
HPS1-208ENST00000467246 GPATCH1Q9BRR8 931 aaKnown RBP11.27□□□□□ -0.61
HPS1-208ENST00000467246 APOL5Q9BWW9 433 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 SUV39H2Q9H5I1 410 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 ZDHHC6Q9H6R6 413 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 EPS15L1Q9UBC2 864 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 SCOCQ9UIL1 159 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 HS3ST2Q9Y278 367 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 NDUFAF1Q9Y375 327 aa11.27□□□□□ -0.61
HPS1-208ENST00000467246 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 BBIP1A8MTZ0 92 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 NME4O00746 187 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 OR7A17O14581 309 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 TAPBPO15533 448 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 GLUD1P00367 558 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 CAPN1P07384 714 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 GDF5P43026 501 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 GJA8P48165 433 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 HSPA7P48741 367 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 NAA20P61599 178 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 UFM1P61960 85 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 PTSQ03393 145 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 PCBP2Q15366 365 aaKnown RBP eCLIP11.26□□□□□ -0.614e-9■■■■■ 37.7
HPS1-208ENST00000467246 TEAD2Q15562 447 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 SAMD4BQ5PRF9 694 aaKnown RBP11.26□□□□□ -0.61
HPS1-208ENST00000467246 GPRC6AQ5T6X5 926 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 PLPP4Q5VZY2 271 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 GRAMD4Q6IC98 578 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
HPS1-208ENST00000467246 METTL6Q8TCB7 284 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 ASIC4Q96FT7 647 aa11.26□□□□□ -0.61
HPS1-208ENST00000467246 DCUN1D1Q96GG9 259 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms