RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PABPC5Q96DU9 382 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 MRGPRX2Q96LB1 330 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 MUS81Q96NY9 551 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 SOX17Q9H6I2 414 aaPredicted RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 ABCC13Q9NSE7 274 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 INTS10Q9NVR2 710 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 ACOT9Q9Y305 439 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 SNX5Q9Y5X3 404 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 CNTN5O94779 1100 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 HMBSP08397 361 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 BMP1P13497 986 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 PKLRP30613 574 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 GALK2Q01415 458 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 YWHAHQ04917 246 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 EIF4EBP2Q13542 120 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 AGKQ53H12 422 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 R3HCC1LQ7Z5L2 792 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 MRPL10Q7Z7H8 261 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 CIR1Q86X95 450 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 AFAP1L2Q8N4X5 818 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 SH3RF2Q8TEC5 729 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 MYRFLQ96LU7 910 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 SLC25A23Q9BV35 468 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 SLA2Q9H6Q3 261 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 TNFRSF10BO14763 440 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 DDHD2O94830 711 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 HAPLN1P10915 354 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 RRM2P31350 389 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 TUSC3Q13454 348 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 ZYG11AQ6WRX3 759 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 IFNL1Q8IU54 200 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 SPPL2CQ8IUH8 684 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 PELI3Q8N2H9 469 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 HDAC2Q92769 488 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 TSNARE1Q96NA8 513 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 FCRL5Q96RD9 977 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 NT5MQ9NPB1 228 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 MN1Q10571 1320 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 CENPXA8MT69 81 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 FAM25AB3EWG3 89 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 FAM25CB3EWG5 89 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 FAM25GB3EWG6 89 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 TMCC2O75069 709 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 XYLBO75191 536 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 GABARAPO95166 117 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 GPIP06744 558 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 IMPDH1P20839 514 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 ARPP19P56211 112 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 GABARAPL2P60520 117 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 SLC10A7Q0GE19 358 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 CSHL1Q14406 222 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 ALFQ53S48 1182 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 TSTD2Q5T7W7 516 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 PIK3R6Q5UE93 754 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 MIB1Q86YT6 1006 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 THEM5Q8N1Q8 247 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 HEXDCQ8WVB3 486 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 VPS35Q96QK1 796 aa17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 UBA2Q9UBT2 640 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-205ENST00000467062 OR51F1A6NGY5 319 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 NRP2O60462 931 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 STMN1P16949 149 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 TSPAN8P19075 237 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 KCNA5P22460 613 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 IL12AP29459 219 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 ETV3P41162 512 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 WNT3AP56704 352 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 RAB10P61026 200 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 RACK1P63244 317 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 BNIP2Q12982 314 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 SNAP47Q5SQN1 464 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 AGAP6Q5VW22 663 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 C8orf82Q6P1X6 216 aaPredicted RBP17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 LAYNQ6UX15 382 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 THAP5Q7Z6K1 395 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 SVOPQ8N4V2 548 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 PPHLN1Q8NEY8 458 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 AGAP4Q96P64 663 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 GPR78Q96P69 363 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 TMEM246Q9BRR3 403 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 ANKHQ9HCJ1 492 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 NOD1Q9Y239 953 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 M0QZQ0 153 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 CACNG3O60359 315 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 NDUFS2O75306 463 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 MT-CO1P00395 513 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 POLR2CP19387 275 aaPredicted RBP17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 PTPRCAPQ14761 206 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 DUSP7Q16829 419 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 TJAP1Q5JTD0 557 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 DESI1Q6ICB0 168 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 LCN8Q6JVE9 175 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 ZNF544Q6NX49 715 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 ATAD1Q8NBU5 361 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 OR13J1Q8NGT2 312 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 GLMNQ92990 594 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 TSGA13Q96PP4 275 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 TNFRSF12AQ9NP84 129 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 CCDC167Q9P0B6 97 aa17.85■□□□□ 0.45
SNAPC3-205ENST00000467062 KCTD3Q9Y597 815 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms