RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DGKGP49619 791 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 CLCN7P51798 805 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PNLIPRP1P54315 467 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ABATP80404 500 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PRR5P85299 388 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 RGS21Q2M5E4 152 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 GFOD2Q3B7J2 385 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ALG1LQ6GMV1 187 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ISLR2Q6UXK2 745 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 NPLOC4Q8TAT6 608 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PIGXQ8TBF5 258 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 SLC22A17Q8WUG5 538 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PIK3R3Q92569 461 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 TCF12Q99081 682 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 HEPHQ9BQS7 1158 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 UNC93B1Q9H1C4 597 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 FBXO5Q9UKT4 447 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 DMTF1Q9Y222 760 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 A0A1W2PQ45 241 aaPredicted RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 A0A1W2PQY0 241 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 TSPAN1O60635 241 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 CYP17A1P05093 508 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PFKMP08237 780 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ABHD2P08910 425 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 FAM153BP0C7A2 387 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 MAT2AP31153 395 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 SLC5A3P53794 718 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 IL18Q14116 193 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 AMZ1Q400G9 498 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 CCDC80Q76M96 950 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 TMEM192Q8IY95 271 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 OR4K2Q8NGD2 314 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 HDAC7Q8WUI4 952 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 STYXQ8WUJ0 223 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 WDR60Q8WVS4 1066 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 APOLD1Q96LR9 279 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 CHID1Q9BWS9 393 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 TRIM39Q9HCM9 518 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 CNOT6Q9ULM6 557 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 NHSL1Q5SYE7 1610 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ALS2Q96Q42 1657 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 MDM4O15151 490 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PAPSS2O95340 614 aaPredicted RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 FABP3P05413 133 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 IL12AP29459 219 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 GRK6P43250 576 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 GNPDA1P46926 289 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 RABGGTBP53611 331 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 TLE2Q04725 743 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 RASGEF1BQ0VAM2 473 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 KCTD21Q4G0X4 260 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 THAP5Q7Z6K1 395 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 CUZD1Q86UP6 607 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 GAL3ST3Q96A11 431 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ANKZF1Q9H8Y5 726 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 GMEB2Q9UKD1 530 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 GRIP1Q9Y3R0 1128 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ZNF536O15090 1300 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 DNM1LO00429 736 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PRMT5O14744 637 aaPredicted RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 SYN3O14994 580 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PGM3O95394 542 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 POP4O95707 220 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 APOC1P02654 83 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 KCNJ5P48544 419 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ADARP55265 1226 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 NAE1Q13564 534 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 FUT10Q6P4F1 479 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 CCDC36Q8IYA8 594 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PARP8Q8N3A8 854 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 IRGQQ8WZA9 623 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 MIOSQ9NXC5 875 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 IGKV6D-41A0A0C4DH26 115 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 DHX15O43143 795 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 SPATA31C1P0DKV0 1188 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 PKMP14618 531 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 EIF2S3P41091 472 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 SLC20A2Q08357 652 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 IL18R1Q13478 541 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 SLC9B1Q4ZJI4 515 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 EIPR1Q53HC9 387 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 RNASEH2BQ5TBB1 312 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 PRSS58Q8IYP2 241 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 TRPV1Q8NER1 839 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 ZMIZ2Q8NF64 920 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 GSDMCQ9BYG8 508 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 MRPS30Q9NP92 439 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 PNO1Q9NRX1 252 aaKnown RBP8.62□□□□□ -1.03
HPS4-209ENST00000466781 LAMB4A4D0S4 1761 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 SCN11AQ9UI33 1791 aa8.62□□□□□ -1.03
HPS4-209ENST00000466781 OR2AG2A6NM03 316 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 HDAC3O15379 428 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CCNB2O95067 398 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CYP3A5P20815 502 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 SDC2P34741 201 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CCR10P46092 362 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 KHKP50053 298 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 OR5B17Q8NGF7 314 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 RCN3Q96D15 328 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms