RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 E7ESA3 106 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 GOLGA8TH3BQL2 631 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 ZNF500O60304 480 aaPredicted RBP19.95■□□□□ 0.78
PTCD3-206ENST00000465560 OR1I1O60431 355 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 SNX2O60749 519 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 CDK4P11802 303 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 F3P13726 295 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 SLC2A4P14672 509 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 PBLDP30039 288 aaPredicted RBP19.95■□□□□ 0.78
PTCD3-206ENST00000465560 ELK3P41970 407 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 MAZP56270 477 aaKnown RBP19.95■□□□□ 0.78
PTCD3-206ENST00000465560 CAV1Q03135 178 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 CRYMQ14894 314 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 LONRF1Q17RB8 773 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 TYSND1Q2T9J0 566 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 LDB1Q86U70 411 aaPredicted RBP19.95■□□□□ 0.78
PTCD3-206ENST00000465560 IGDCC3Q8IVU1 814 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 OTUD6BQ8N6M0 293 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.95■□□□□ 0.78
PTCD3-206ENST00000465560 OR2L2Q8NH16 312 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 SEC14L1Q92503 715 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 ART4Q93070 314 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 WDR83Q9BRX9 315 aaKnown RBP19.95■□□□□ 0.78
PTCD3-206ENST00000465560 VPS37BQ9H9H4 285 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 IL1RAPL1Q9NZN1 696 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 TEX264Q9Y6I9 313 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 PRSS21Q9Y6M0 314 aa19.95■□□□□ 0.78
PTCD3-206ENST00000465560 NUDT21O43809 227 aaKnown RBP19.94■□□□□ 0.78
PTCD3-206ENST00000465560 TRIM16O95361 564 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 GLB1P16278 677 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 OGNP20774 298 aaKnown RBP19.94■□□□□ 0.78
PTCD3-206ENST00000465560 IDSP22304 550 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 PMLP29590 882 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 NFE2L1Q14494 772 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 SMAD1Q15797 465 aaKnown RBP19.94■□□□□ 0.78
PTCD3-206ENST00000465560 GLE1Q53GS7 698 aaKnown RBP19.94■□□□□ 0.78
PTCD3-206ENST00000465560 CCDC157Q569K6 752 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 SPANXN3Q5MJ09 141 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 NEPROQ6NW34 567 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 IYDQ6PHW0 289 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 WASH2PQ6VEQ5 465 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 SDCCAG8Q86SQ7 713 aaPredicted RBP19.94■□□□□ 0.78
PTCD3-206ENST00000465560 SFRP1Q8N474 314 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 ARL14Q8N4G2 192 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 HM13Q8TCT9 377 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 MAPK15Q8TD08 544 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 SLC37A2Q8TED4 501 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 ADAMTS14Q8WXS8 1223 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 CARD6Q9BX69 1037 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 WASH6PQ9NQA3 447 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 PRDM8Q9NQV8 689 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 CHMP2BQ9UQN3 213 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 COL27A1Q8IZC6 1860 aaPredicted RBP19.94■□□□□ 0.78
PTCD3-206ENST00000465560 UNC13CQ8NB66 2214 aa19.94■□□□□ 0.78
PTCD3-206ENST00000465560 KIR2DS5A0A0G2JLQ3 304 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 A0A0G2JNG1 304 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 C17orf113A0A1B0GUU1 675 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 OR5K4A6NMS3 321 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 KIR2DS3K7RE56 304 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 GSTM1P09488 218 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 FASLGP48023 281 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 GSTM4Q03013 218 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 PDIA2Q13087 525 aaKnown RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 THOC5Q13769 683 aaKnown RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 KIR2DS5Q14953 304 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 TRADDQ15628 312 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 SEPT7Q16181 437 aaKnown RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 HP1BP3Q5SSJ5 553 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 PERM1Q5SV97 790 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 RNF187Q5TA31 235 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 AGAP9Q5VTM2 703 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 METRNLQ641Q3 311 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 ABRAXAS1Q6UWZ7 409 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 FAM83HQ6ZRV2 1179 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 CENPUQ71F23 418 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 CILP2Q8IUL8 1156 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 LMNTD2Q8IXW0 634 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 FBXO25Q8TCJ0 367 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 CCDC74AQ96AQ1 378 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 TCF12Q99081 682 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 CCM2Q9BSQ5 444 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 C20orf96Q9NUD7 363 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 ZC3H7BQ9UGR2 993 aaKnown RBP19.93■□□□□ 0.78
PTCD3-206ENST00000465560 RNF215Q9Y6U7 377 aa19.93■□□□□ 0.78
PTCD3-206ENST00000465560 ESYT3A0FGR9 886 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 PDZK1P1A8MUH7 402 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 BHMG1C9JSJ3 638 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-206ENST00000465560 F8W8V4 182 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 PRMT5O14744 637 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-206ENST00000465560 PFDN6O15212 129 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 EIF3HO15372 352 aaKnown RBP eCLIP19.92■□□□□ 0.78
PTCD3-206ENST00000465560 NDUFS3O75489 264 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 FTH1P02794 183 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 ADRB1P08588 477 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 OR56A5P0C7T3 313 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 BRAFP15056 766 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 PNLIPP16233 465 aa19.92■□□□□ 0.78
PTCD3-206ENST00000465560 RPS3P23396 243 aaKnown RBP eCLIP19.92■□□□□ 0.781e-6■■□□□ 12.1
PTCD3-206ENST00000465560 RPL10P27635 214 aaKnown RBP19.92■□□□□ 0.78
PTCD3-206ENST00000465560 PLTPP55058 493 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms