RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ITGB6P18564 788 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 LPOP22079 712 aaPredicted RBP18.5■□□□□ 0.55
SF3A1-205ENST00000463818 FECHP22830 423 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 CTNNA2P26232 953 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 PTPN7P35236 360 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 ADRA1AP35348 466 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 SEPHS1P49903 392 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 RWDD2BP57060 319 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 EIF3EP60228 445 aaKnown RBP18.5■□□□□ 0.55
SF3A1-205ENST00000463818 FOXM1Q08050 763 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 NFATC3Q12968 1075 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 OLIG2Q13516 323 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 GPR18Q14330 331 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 RAD9BQ6WBX8 426 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 GAS2L3Q86XJ1 694 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 CDKL3Q8IVW4 592 aaPredicted RBP18.5■□□□□ 0.55
SF3A1-205ENST00000463818 FAM118BQ9BPY3 351 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 APOL2Q9BQE5 337 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 SIDT1Q9NXL6 827 aaKnown RBP18.5■□□□□ 0.55
SF3A1-205ENST00000463818 AAR2Q9Y312 384 aaKnown RBP18.5■□□□□ 0.55
SF3A1-205ENST00000463818 TMEM184BQ9Y519 407 aaPredicted RBP18.5■□□□□ 0.55
SF3A1-205ENST00000463818 KCTD3Q9Y597 815 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 LOC101059948A0A1B0GTJ6 334 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 OR2AG2A6NM03 316 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 C2orf81A6NN90 581 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 TOX3O15405 576 aaPredicted RBP18.49■□□□□ 0.55
SF3A1-205ENST00000463818 KCNN4O15554 427 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 PJA2O43164 708 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 KIF1CO43896 1103 aaKnown RBP18.49■□□□□ 0.55
SF3A1-205ENST00000463818 STK17BO94768 372 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 PYGMP11217 842 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 MSH3P20585 1137 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 PSMB4P28070 264 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 CETN2P41208 172 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 HALP42357 657 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 DMPKQ09013 629 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 PRPSAP1Q14558 356 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 TAF1AQ15573 450 aaPredicted RBP18.49■□□□□ 0.55
SF3A1-205ENST00000463818 RPE65Q16518 533 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 AADACL2Q6P093 401 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 FAM83HQ6ZRV2 1179 aaPredicted RBP18.49■□□□□ 0.55
SF3A1-205ENST00000463818 UNC5BQ8IZJ1 945 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 OR4K2Q8NGD2 314 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 RSC1A1Q92681 617 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 TRIT1Q9H3H1 467 aaKnown RBP18.49■□□□□ 0.55
SF3A1-205ENST00000463818 GPN2Q9H9Y4 310 aaPredicted RBP18.49■□□□□ 0.55
SF3A1-205ENST00000463818 EPHA6Q9UF33 1036 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 PSMD13Q9UNM6 376 aa18.49■□□□□ 0.55
SF3A1-205ENST00000463818 C5orf60A6NFR6 353 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 ZNF891A8MT65 544 aaPredicted RBP18.48■□□□□ 0.55
SF3A1-205ENST00000463818 NKX2-8O15522 239 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 RASSF9O75901 435 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 STK10O94804 968 aaKnown RBP18.48■□□□□ 0.55
SF3A1-205ENST00000463818 SFTPCP11686 197 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 SH3BP2P78314 561 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 NFE2L1Q14494 772 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 LONRF2Q1L5Z9 754 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 CACHD1Q5VU97 1274 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 ACRBPQ8NEB7 543 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 CCDC110Q8TBZ0 833 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 ALG3Q92685 438 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 KIAA1143Q96AT1 154 aaPredicted RBP18.48■□□□□ 0.55
SF3A1-205ENST00000463818 ZDHHC12Q96GR4 267 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 SLC45A3Q96JT2 553 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 ZNF514Q96K75 400 aaPredicted RBP18.48■□□□□ 0.55
SF3A1-205ENST00000463818 ZNF768Q9H5H4 540 aaKnown RBP18.48■□□□□ 0.55
SF3A1-205ENST00000463818 ASB8Q9H765 288 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 STARD5Q9NSY2 213 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 SMOXQ9NWM0 555 aa18.48■□□□□ 0.55
SF3A1-205ENST00000463818 SLC28A2O43868 658 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 TJP3O95049 919 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 PRAMEF1O95521 474 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 DLGAP3O95886 979 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 PBLDP30039 288 aaPredicted RBP18.47■□□□□ 0.55
SF3A1-205ENST00000463818 AKT1P31749 480 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 CAPZBP47756 277 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 VAV2P52735 878 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 ABHD18Q0P651 414 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 MSLNQ13421 630 aaPredicted RBP18.47■□□□□ 0.55
SF3A1-205ENST00000463818 FNBP1LQ5T0N5 605 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 METRNLQ641Q3 311 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 IRGCQ6NXR0 463 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 FAM92BQ6ZTR7 304 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 DET1Q7L5Y6 550 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 PRSS42Q7Z5A4 293 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 BEND7Q8N7W2 519 aaPredicted RBP18.47■□□□□ 0.55
SF3A1-205ENST00000463818 LRRC57Q8N9N7 239 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 RNF31Q96EP0 1072 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 SPATA13Q96N96 652 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 OR6C1Q96RD1 312 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 EFHD1Q9BUP0 239 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 FAM117AQ9C073 453 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 GEMIN8Q9NWZ8 242 aaKnown RBP18.47■□□□□ 0.55
SF3A1-205ENST00000463818 IL17BQ9UHF5 180 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 FKBPLQ9UIM3 349 aa18.47■□□□□ 0.55
SF3A1-205ENST00000463818 HEMK1Q9Y5R4 338 aaPredicted RBP18.47■□□□□ 0.55
SF3A1-205ENST00000463818 GRID2IPA4D2P6 1211 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 MGAT4DA6NG13 374 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 SRP72O76094 671 aaKnown RBP18.46■□□□□ 0.55
SF3A1-205ENST00000463818 XIAPP98170 497 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms