RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 THAP3Q8WTV1 239 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-211ENST00000463372 ZNF606Q8WXB4 792 aa12.99□□□□□ -0.33
C9orf3-211ENST00000463372 NACC2Q96BF6 587 aa12.99□□□□□ -0.33
C9orf3-211ENST00000463372 DMRTA2Q96SC8 542 aa12.99□□□□□ -0.33
C9orf3-211ENST00000463372 ABCG8Q9H221 673 aa12.99□□□□□ -0.33
C9orf3-211ENST00000463372 TRPS1Q9UHF7 1281 aa12.99□□□□□ -0.33
C9orf3-211ENST00000463372 C17orf113A0A1B0GUU1 675 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 TRAFD1O14545 582 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-211ENST00000463372 POLR2DO15514 142 aaKnown RBP12.98□□□□□ -0.33
C9orf3-211ENST00000463372 DDX3YO15523 660 aaKnown RBP12.98□□□□□ -0.33
C9orf3-211ENST00000463372 KLRC4O43908 158 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 MTA2O94776 668 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 ATE1O95260 518 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 MYBL2P10244 700 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 BRAFP15056 766 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 RGRP47804 291 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 SYCP1Q15431 976 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 KRTCAP3Q53RY4 240 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 MANEALQ5VSG8 457 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 C3P1Q6ZMU1 363 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 CDC20BQ86Y33 519 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 CIARTQ8N365 385 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-211ENST00000463372 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 SUN3Q8TAQ9 357 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 SCAMP4Q969E2 229 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 TBC1D31Q96DN5 1066 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 UCK2Q9BZX2 261 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 SYTL2Q9HCH5 934 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 RASSF1Q9NS23 344 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 PLA2G3Q9NZ20 509 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 IFT80Q9P2H3 777 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-211ENST00000463372 SERTAD3Q9UJW9 196 aa12.98□□□□□ -0.33
C9orf3-211ENST00000463372 MORC2Q9Y6X9 1032 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-211ENST00000463372 E7EQ34 232 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 ARHGEF9O43307 516 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 ZNF749O43361 778 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 KCNAB3O43448 404 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 TOXO94900 526 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
C9orf3-211ENST00000463372 TSPAN12O95859 305 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 ERBB2P04626 1255 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 UMODP07911 640 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 TNFAIP3P21580 790 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 LHCGRP22888 699 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 YBEYP58557 167 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-211ENST00000463372 ZFYVE27Q5T4F4 411 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 ZNF385CQ66K41 422 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-211ENST00000463372 NAPRTQ6XQN6 538 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 KRTAP1-3Q8IUG1 177 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 ZZZ3Q8IYH5 903 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
C9orf3-211ENST00000463372 LILRB4Q8NHJ6 448 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 GPR137Q96N19 417 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 PWWP2AQ96N64 755 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 NOL6Q9H6R4 1146 aaKnown RBP12.97□□□□□ -0.33
C9orf3-211ENST00000463372 CDC23Q9UJX2 597 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 CPAMD8Q8IZJ3 1885 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 MEGF8Q7Z7M0 2845 aa12.97□□□□□ -0.33
C9orf3-211ENST00000463372 A0A1W2PQ67 120 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 OR52A4PA6NMU1 304 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 FAM227AF5H4B4 570 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 PRRG2O14669 202 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 WISP2O76076 250 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 LRIG2O94898 1065 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 CPP00450 1065 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 ZNF30P17039 623 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 MMP11P24347 488 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 GNA15P30679 374 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 CHRNB4P30926 498 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 FOXL2P58012 376 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 CACNG1Q06432 222 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 CBLBQ13191 982 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 INSCQ1MX18 579 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 TUBB8Q3ZCM7 444 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 PARP15Q460N3 678 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 NLRP8Q86W28 1048 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 DOLPP1Q86YN1 238 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 GRAMD1CQ8IYS0 662 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 CARFQ8N187 725 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 MYRIPQ8NFW9 859 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 HAS2Q92819 552 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 VPS50Q96JG6 964 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 AGAP2Q99490 1192 aa12.96□□□□□ -0.33
C9orf3-211ENST00000463372 MRPS2Q9Y399 296 aaKnown RBP12.96□□□□□ -0.33
C9orf3-211ENST00000463372 MPDZO75970 2070 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-211ENST00000463372 FAM72CH0Y354 149 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 NUAK1O60285 661 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 PALMO75781 387 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 CBSLP0DN79 551 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 RPL10P27635 214 aaKnown RBP12.95□□□□□ -0.34
C9orf3-211ENST00000463372 CBSP35520 551 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 SCNN1BP51168 640 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 DCDP81605 110 aaKnown RBP12.95□□□□□ -0.34
C9orf3-211ENST00000463372 PMP22Q01453 160 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 SLC9A5Q14940 896 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 FAM72AQ5TYM5 149 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 C1orf189Q5VU69 101 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms