RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RPS3P23396 243 aaKnown RBP eCLIP11.6□□□□□ -0.552e-11■■■■□ 19.3
CPNE1-221ENST00000462352 PBLDP30039 288 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 CLCNKAP51800 687 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 MGAT5Q09328 741 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 RSPO4Q2I0M5 234 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 C6orf132Q5T0Z8 1188 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 TEDDM1Q5T9Z0 273 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 LVRNQ6Q4G3 990 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 C3orf62Q6ZUJ4 267 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 PIP4P1Q86T03 277 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 AMZ2Q86W34 360 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 RELL1Q8IUW5 271 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 CNTN4Q8IWV2 1026 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 C2CD4AQ8NCU7 369 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 FAM46DQ8NEK8 389 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 GABPB2Q8TAK5 448 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 CAMK1GQ96NX5 476 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 LRRC4CQ9HCJ2 640 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 FBXO6Q9NRD1 293 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 SPATS2LQ9NUQ6 558 aaKnown RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 INTS10Q9NVR2 710 aaKnown RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 MOCS1Q9NZB8 636 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 SLC17A6Q9P2U8 582 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 FBXO5Q9UKT4 447 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 CDV3Q9UKY7 258 aaKnown RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 PCOLCE2Q9UKZ9 415 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 DNAJC16Q9Y2G8 782 aa11.6□□□□□ -0.55
CPNE1-221ENST00000462352 V9GYY5 206 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-221ENST00000462352 TCRBV9S1A1TA0A576 114 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 MGAT4DA6NG13 374 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 B4DGG1 531 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 TM4SF5O14894 197 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 KCNJ13O60928 360 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 CBFA2T3O75081 653 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 HAUS5O94927 633 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 FTH1P02794 183 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 MYBL2P10244 700 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 TNFRSF8P28908 595 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 LEPRP48357 1165 aaKnown RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 ADARP55265 1226 aaKnown RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 EIF3BP55884 814 aaKnown RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 MPP1Q00013 466 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 DMPKQ09013 629 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 NFE2L1Q14494 772 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 KYNUQ16719 465 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 CTSL3PQ5NE16 218 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 ZCCHC8Q6NZY4 707 aaKnown RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 CYS1Q717R9 158 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 LRRC6Q86X45 466 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 SFTPA2Q8IWL1 248 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 GSPT2Q8IYD1 628 aaKnown RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 EIF1ADQ8N9N8 165 aaKnown RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 OR2L2Q8NH16 312 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 BAHD1Q8TBE0 780 aaPredicted RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 ZDHHC1Q8WTX9 485 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 UBXN4Q92575 508 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 BIRC8Q96P09 236 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 CCM2Q9BSQ5 444 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 CDC42EP4Q9H3Q1 356 aaKnown RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 DPEP2Q9H4A9 486 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 OSGEPL1Q9H4B0 414 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 VPS37BQ9H9H4 285 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
CPNE1-221ENST00000462352 SMYD2Q9NRG4 433 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 NINJ2Q9NZG7 142 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 SIRPGQ9P1W8 387 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 ZFATQ9P243 1243 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 GULP1Q9UBP9 304 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 FAM8A1Q9UBU6 413 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 TBC1D29Q9UFV1 150 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 GNPTGQ9UJJ9 305 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 CRYL1Q9Y2S2 319 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 PCDHB1Q9Y5F3 818 aa11.59□□□□□ -0.55
CPNE1-221ENST00000462352 ARID1BQ8NFD5 2236 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-221ENST00000462352 C17orf113A0A1B0GUU1 675 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 KLHL33A6NCF5 533 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 IQCF5A8MTL0 148 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 F8W8V4 182 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 NOBOXO60393 691 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 SNX2O60749 519 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 SPAG6O75602 509 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 EML2O95834 649 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 C1QAP02745 245 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 ESR1P03372 595 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 GSTM1P09488 218 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 FAM153BP0C7A2 387 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 SDHBP21912 280 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 IDSP22304 550 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 GABRB3P28472 473 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 FMO4P31512 558 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 GSTM4Q03013 218 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 ERCC6LQ2NKX8 1250 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 FAM153CQ494X1 144 aa11.58□□□□□ -0.56
CPNE1-221ENST00000462352 ZNF658BQ4V348 819 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-221ENST00000462352 UBAP2Q5T6F2 1119 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms