RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ARRDC1-AS1Q9H2J1 176 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 TRABDQ9H4I3 376 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 C10orf88Q9H8K7 445 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 DYRK4Q9NR20 520 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 RXFP3Q9NSD7 469 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 TRMT1Q9NXH9 659 aaKnown RBP5.72□□□□□ -1.49
VPS36-202ENST00000462289 DLL3Q9NYJ7 618 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 FEZ2Q9UHY8 353 aaPredicted RBP5.72□□□□□ -1.49
VPS36-202ENST00000462289 EIF2B4Q9UI10 523 aaKnown RBP5.72□□□□□ -1.49
VPS36-202ENST00000462289 GMEB2Q9UKD1 530 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 RIMKLBQ9ULI2 386 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 PNMA8BQ9ULN7 279 aaPredicted RBP5.72□□□□□ -1.49
VPS36-202ENST00000462289 CHKBQ9Y259 395 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 PCDHGB2Q9Y5G2 931 aa5.72□□□□□ -1.49
VPS36-202ENST00000462289 TBC1D3DA0A087WVF3 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3IA0A087WXS9 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3EA0A087X179 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3KA0A087X1G2 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 SPTY2D1-AS1A0A0U1RR47 76 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3FA6NER0 549 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 POM121BA6NF01 834 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 IGLON5A6NGN9 336 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 MROH6A6NGR9 719 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3LB9A6J9 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 H7C0C1 242 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ZNF185O15231 689 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 KCNN4O15554 427 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 DFNA5O60443 496 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 CBFA2T3O75081 653 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 PHF2O75151 1096 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 PPFIA2O75334 1257 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TM7SF2O76062 418 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 RECQL5O94762 991 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 TUBB4AP04350 444 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 PTMAP06454 111 aaKnown RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 C1SP09871 688 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3HP0C7X1 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 PSMB4P28070 264 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 CD38P28907 300 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 CXCR5P32302 372 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 RPL22P35268 128 aaKnown RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 FDFT1P37268 417 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ATP5OP48047 213 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 SPINT3P49223 89 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 DHPSP49366 369 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 GEMP55040 296 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 KIAA1024LP59773 190 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 GNG11P61952 73 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 YPEL5P62699 121 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 CDK16Q00536 496 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 GRIK2Q13002 908 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 SLC14A1Q13336 389 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 MTM1Q13496 603 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 KCNJ11Q14654 390 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 PTPRRQ15256 657 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 VMACQ2NL98 169 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 POM121L1PQ3SYA9 428 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ODF2Q5BJF6 829 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TRIM61Q5EBN2 209 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 SIRPB2Q5JXA9 342 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TPRG1LQ5T0D9 272 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 FAM182AQ5T1J6 154 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ZFYVE27Q5T4F4 411 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 LRRC66Q68CR7 880 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3GQ6DHY5 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3CQ6IPX1 549 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 KRTAP5-3Q6L8H2 238 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ERAP2Q6P179 960 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 B4GALNT4Q76KP1 1039 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 PID1Q7Z2X4 250 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 HSD11B1LQ7Z5J1 315 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TSPAN33Q86UF1 283 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ZNF354CQ86Y25 554 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TBC1D3Q8IZP1 549 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 C17orf53Q8N3J3 647 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 DCLK2Q8N568 766 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 FAM71DQ8N9W8 422 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ATL2Q8NHH9 583 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 CCDC110Q8TBZ0 833 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 C1orf54Q8WWF1 131 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 FAM122AQ96E09 287 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 MS4A14Q96JA4 679 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 FCRL3Q96P31 734 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 PLEKHG4BQ96PX9 1271 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 SMIM14Q96QK8 99 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 FERD3LQ96RJ6 166 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 NAP1L3Q99457 506 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 NAPGQ99747 312 aaPredicted RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 FAM118BQ9BPY3 351 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 ADGRE3Q9BY15 652 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 MBNL1Q9NR56 388 aaKnown RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 SMOXQ9NWM0 555 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 HACD3Q9P035 362 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 IL17CQ9P0M4 197 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 TMPRSS11EQ9UL52 423 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 RAB23Q9ULC3 237 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 AAR2Q9Y312 384 aaKnown RBP5.71□□□□□ -1.5
VPS36-202ENST00000462289 SPO11Q9Y5K1 396 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 SAR1BQ9Y6B6 198 aa5.71□□□□□ -1.5
VPS36-202ENST00000462289 DGKBQ9Y6T7 804 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms