RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PPARGP37231 505 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PDX1P52945 283 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MAZP56270 477 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PRAMEP78395 509 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 RHDQ02161 417 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CACNG1Q06432 222 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PTK6Q13882 451 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 COL9A2Q14055 689 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 DHX34Q14147 1143 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZNF648Q5T619 568 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 GPRC6AQ5T6X5 926 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 B3GNT8Q7Z7M8 397 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 NRROSQ86YC3 692 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PPIL6Q8IXY8 311 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 DDHD1Q8NEL9 900 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CPT1BQ92523 772 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PRR11Q96HE9 360 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 AHCYL2Q96HN2 611 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 COPS8Q99627 209 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PISDQ9UG56 409 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TMPRSS11EQ9UL52 423 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ATXN7L1Q9ULK2 861 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TCAF1Q9Y4C2 921 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 LOXL2Q9Y4K0 774 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PCDHB11Q9Y5F2 797 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CCDC78A2IDD5 438 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SDR42E2A6NKP2 422 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 AGAP14A8MT82 685 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SMAPO00193 183 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 NDC80O14777 642 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ATXN7O15265 892 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 FANCGO15287 622 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZNF7P17097 686 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SLC5A2P31639 672 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PTGIRP43119 386 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CLCNKAP51800 687 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 OR1D5P58170 312 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 B4GALNT1Q00973 533 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZFP36L1Q07352 338 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 VAC14Q08AM6 782 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 C19orf57Q0VDD7 668 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TUBB2AQ13885 445 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 INSCQ1MX18 579 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TAF1BQ53T94 588 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 LYPLAL1Q5VWZ2 237 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TMEM220Q6QAJ8 160 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CCDC81Q6ZN84 652 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MAATS1Q7Z4T9 603 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZNF438Q7Z4V0 828 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 C17orf82Q86X59 251 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 NXPE1Q8N323 547 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 AVL9Q8NBF6 648 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 OR6P1Q8NGX9 317 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SLC39A7Q92504 469 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 HDAC10Q969S8 669 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SLC38A3Q99624 504 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TIMM29Q9BSF4 260 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TUBB2BQ9BVA1 445 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 FAM96AQ9H5X1 160 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MRM3Q9HC36 420 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZDHHC3Q9NYG2 299 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KCNK4Q9NYG8 393 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SAMD15Q9P1V8 674 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ANAPC5Q9UJX4 755 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PRKAB1Q9Y478 270 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PLEKHM1Q9Y4G2 1056 aa13.03□□□□□ -0.32
RAB11FIP3-207ENST00000461009 LAMA5O15230 3695 aa13.02□□□□□ -0.32
RAB11FIP3-207ENST00000461009 A0A1W2PNU3 283 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TCRBV7S3A2A0A539 114 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CCDC162PA2VCL2 907 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 OR5K4A6NMS3 321 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 F8W8V4 182 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ERVH48-1M5A8F1 160 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CCL22O00626 93 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 DNALI1O14645 258 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 NVLO15381 856 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ACP5P13686 325 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 ACRV1P26436 265 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 MGAT1P26572 445 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 GPLD1P80108 840 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.338e-6■□□□□ 10.6
RAB11FIP3-207ENST00000461009 NR1D2Q14995 579 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RNASEH2BQ5TBB1 312 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CASC4Q6P4E1 433 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 AFTPHQ6ULP2 937 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CRTC3Q6UUV7 619 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 CERS6Q6ZMG9 384 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 USP53Q70EK8 1073 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 HOOK3Q86VS8 718 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 SERPINA9Q86WD7 417 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 TRAPPC5Q8IUR0 188 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 RASGEF1AQ8N9B8 481 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.33
RAB11FIP3-207ENST00000461009 SPATA4Q8NEY3 305 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms