RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ANKRD20A4Q4UJ75 823 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 ANKRD20A8PQ5CZ79 823 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 ANKRD20A2Q5SQ80 823 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 ANKRD20A1Q5TYW2 823 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 ANKRD20A3Q5VUR7 823 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 ZNF626Q68DY1 528 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 MIS18BP1Q6P0N0 1132 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 PAPD4Q6PIY7 484 aaKnown RBP2.92□□□□□ -1.94
HPS3-203ENST00000460822 LINC00696Q6ZRV3 163 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 YTHDF3Q7Z739 585 aaKnown RBP2.92□□□□□ -1.94
HPS3-203ENST00000460822 DSG4Q86SJ6 1040 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 GLCCI1Q86VQ1 547 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 KLHL7Q8IXQ5 586 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 SEPT1Q8WYJ6 367 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 ROBO4Q8WZ75 1007 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 APBB2Q92870 758 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 ATP6V0A1Q93050 837 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 RPL36ALQ969Q0 106 aaKnown RBP2.92□□□□□ -1.94
HPS3-203ENST00000460822 RMDN2Q96LZ7 410 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 MS4A10Q96PG2 267 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 TSPAN18Q96SJ8 248 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 KATNB1Q9BVA0 655 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 RAD21L1Q9H4I0 556 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 TBC1D17Q9HA65 648 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 MMP25Q9NPA2 562 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 EQTNQ9NQ60 294 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 SIRT3Q9NTG7 399 aaPredicted RBP2.92□□□□□ -1.94
HPS3-203ENST00000460822 TMEM51Q9NW97 253 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 HPF1Q9NWY4 346 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 SEPT10Q9P0V9 454 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 HEY2Q9UBP5 337 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 TTC7AQ9ULT0 858 aaPredicted RBP2.92□□□□□ -1.94
HPS3-203ENST00000460822 B3GALT5Q9Y2C3 310 aa2.92□□□□□ -1.94
HPS3-203ENST00000460822 B4DGG1 531 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TRIM77I1YAP6 450 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TIMM23O14925 209 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ZNF263O14978 683 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 LDB2O43679 373 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 OLFM2O95897 454 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 BMP15O95972 392 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 PNPP00491 289 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 KLKB1P03952 638 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 PCP11498 1178 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 GAP43P17677 238 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 DDX5P17844 614 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 AZGP1P25311 298 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 PTPN3P26045 913 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 MMP13P45452 471 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 KCNJ1P48048 391 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 HNRNPKP61978 463 aaKnown RBP eCLIP2.91□□□□□ -1.94
HPS3-203ENST00000460822 ZNF91Q05481 1191 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 PPATQ06203 517 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 GRIK2Q13002 908 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 MAD2L1Q13257 205 aaPredicted RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 KLHL26Q53HC5 615 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 DCAF6Q58WW2 860 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 C6orf136Q5SQH8 315 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 UNC5DQ6UXZ4 953 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SLC36A4Q6YBV0 504 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 GBP6Q6ZN66 633 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SHFQ7M4L6 423 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 PATL1Q86TB9 770 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 LCA5Q86VQ0 697 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 CNGA4Q8IV77 575 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 DSELQ8IZU8 1212 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SLC44A5Q8NCS7 719 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 EXT2Q93063 718 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SPSB1Q96BD6 273 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 NEK1Q96PY6 1258 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 GFM1Q96RP9 751 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 EGFL8Q99944 293 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 FAM118BQ9BPY3 351 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TMEM39BQ9GZU3 492 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 FAM234AQ9H0X4 552 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TNMDQ9H2S6 317 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 FZD8Q9H461 694 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ABCB8Q9NUT2 735 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ACSL5Q9ULC5 683 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SQORQ9Y6N5 450 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 CFAP43Q8NDM7 1665 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 COL3A1P02461 1466 aaPredicted RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 PRXQ9BXM0 1461 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TIAM1Q13009 1591 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 A0A1W2PRV1 198 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 LRRD1A4D1F6 860 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 KCNU1A8MYU2 1149 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 FAM86B1E9PN63 330 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TMEM189-UBE2V1I3L0A0 370 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 CAPN9O14815 690 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 NDUFS4O43181 175 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 STAM2O75886 525 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 FAM86B2P0C5J1 330 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 CTSAP10619 480 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ADRA2CP18825 462 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ZNF75DP51815 510 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SNRPEP62304 92 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 GHRHRQ02643 423 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 HSPB3Q12988 150 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 RPA4Q13156 261 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 UBE2V1Q13404 147 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms