RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 CCBE1Q6UXH8 406 aaPredicted RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 CILP2Q8IUL8 1156 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 ZHX1-C8orf76Q96EF9 292 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 GJD4Q96KN9 370 aaPredicted RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 LRRC3Q9BY71 257 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 DUSP16Q9BY84 665 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SLC39A8Q9C0K1 460 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 AMBNQ9NP70 447 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 C14orf119Q9NWQ9 140 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 VNN3Q9NY84 501 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 MPP6Q9NZW5 540 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 ADGRE2Q9UHX3 823 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 LEF1Q9UJU2 399 aaPredicted RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 EIF3LQ9Y262 564 aaKnown RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 AAR2Q9Y312 384 aaKnown RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 N6AMT1Q9Y5N5 214 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 MIA3Q5JRA6 1907 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 ARVCFO00192 962 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 BCKDKO14874 412 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 GSTA4O15217 222 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SLC22A1O15245 554 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 DYRK3O43781 588 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 EEDO75530 441 aaKnown RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 NPR3P17342 541 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 PTPN2P17706 415 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 HTR1EP28566 365 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 FMO4P31512 558 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 EEFSECP57772 596 aaKnown RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 EMX2Q04743 252 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 CRY1Q16526 586 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 GTDC1Q4AE62 458 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 KIAA0930Q6ICG6 404 aaPredicted RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SYVN1Q86TM6 617 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 CDYL2Q8N8U2 506 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 MINDY2Q8NBR6 621 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 LEMD2Q8NC56 503 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 PIK3C3Q8NEB9 887 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 PROKR1Q8TCW9 393 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 YIPF6Q96EC8 236 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 AURKBQ96GD4 344 aaPredicted RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 TBATAQ96M53 351 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 REXO4Q9GZR2 422 aaKnown RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 AIG1Q9NVV5 245 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SNX6Q9UNH7 406 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 RLFQ13129 1914 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 CCRL2O00421 344 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 RECQL4O94761 1208 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 MOCS2O96007 188 aaPredicted RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 CD36P16671 472 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 ADRA1AP35348 466 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SERPINB10P48595 397 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 OAZ1P54368 228 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 TIAL1Q01085 375 aaKnown RBP eCLIP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SEMA3AQ14563 771 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 ATP6AP1LQ52LC2 224 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 PRSS36Q5K4E3 855 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 NXNL2Q5VZ03 156 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 CES5AQ6NT32 575 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 GDPD3Q7L5L3 318 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 DET1Q7L5Y6 550 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 UNC93AQ86WB7 457 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 CRYBG2Q8N1P7 616 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 GOLM1Q8NBJ4 401 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 APPL2Q8NEU8 664 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 NCLNQ969V3 563 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SLC47A1Q96FL8 570 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 SLC2A13Q96QE2 648 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 THUMPD3Q9BV44 507 aaKnown RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 ACTR8Q9H981 624 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 C8orf4Q9NR00 106 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 MRGBPQ9NV56 204 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 VAPAQ9P0L0 249 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 GALPQ9UBC7 116 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 FNDC3AQ9Y2H6 1198 aaKnown RBP11.57□□□□□ -0.56
CPSF3-202ENST00000460593 TESMINQ9Y4I5 508 aa11.57□□□□□ -0.56
CPSF3-202ENST00000460593 DYTNA2CJ06 578 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 ASB14A6NK59 587 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 CDC7O00311 574 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 NCAM2O15394 837 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 GAS2O43903 313 aaKnown RBP11.56□□□□□ -0.56
CPSF3-202ENST00000460593 TSPAN3O60637 253 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 S1PR4O95977 384 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 ZNF37AP17032 561 aaPredicted RBP11.56□□□□□ -0.56
CPSF3-202ENST00000460593 RPL34P49207 117 aaKnown RBP11.56□□□□□ -0.56
CPSF3-202ENST00000460593 HTR6P50406 440 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 CLCN5P51795 746 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 E2F2Q14209 437 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 RBBP7Q16576 425 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 WSCD1Q658N2 575 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 DLEU7Q6UYE1 221 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 GALNT10Q86SR1 603 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 HID1Q8IV36 788 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 ARHGAP12Q8IWW6 846 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 MICU2Q8IYU8 434 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 METTL4Q8N3J2 472 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 TTC39CQ8N584 583 aa11.56□□□□□ -0.56
CPSF3-202ENST00000460593 BEND7Q8N7W2 519 aaPredicted RBP11.56□□□□□ -0.56
CPSF3-202ENST00000460593 ZNF540Q8NDQ6 660 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms