RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FOXM1Q08050 763 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 CLCA4Q14CN2 919 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 CDKL3Q8IVW4 592 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-207ENST00000460162 ZNF514Q96K75 400 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-207ENST00000460162 PANX2Q96RD6 677 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 GORASP1Q9BQQ3 440 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 FICDQ9BVA6 458 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 TRIM10Q9UDY6 481 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 EPHA6Q9UF33 1036 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 PCDHA3Q9Y5H8 950 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 LOC101059948A0A1B0GTJ6 334 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 MACROD2A1Z1Q3 448 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 STX7O15400 261 aaKnown RBP22.33■■□□□ 1.17
PTPN4-207ENST00000460162 BUD23O43709 281 aaKnown RBP22.33■■□□□ 1.17
PTPN4-207ENST00000460162 UGT1A9O60656 530 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 RASSF9O75901 435 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 NDUFA10O95299 355 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 PRAMEF1O95521 474 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 UGT1A6P19224 532 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 UGT1A1P22309 533 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 UGT1A4P22310 534 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 FECHP22830 423 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 STAT5AP42229 794 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 OTUD4Q01804 1114 aaKnown RBP22.33■■□□□ 1.17
PTPN4-207ENST00000460162 IL11RAQ14626 422 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 LONRF2Q1L5Z9 754 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 CYB5D1Q6P9G0 228 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 ACTL9Q8TC94 416 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 ZDHHC12Q96GR4 267 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 ULBP3Q9BZM4 244 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 SLC25A18Q9H1K4 315 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 UGT1A7Q9HAW7 530 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 UGT1A10Q9HAW8 530 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 UGT1A8Q9HAW9 530 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 TUBD1Q9UJT1 453 aa22.33■■□□□ 1.17
PTPN4-207ENST00000460162 AAR2Q9Y312 384 aaKnown RBP22.33■■□□□ 1.17
PTPN4-207ENST00000460162 CCDC66A2RUB6 948 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 KLHL33A6NCF5 533 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 OR2AG2A6NM03 316 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 POP7O75817 140 aaKnown RBP22.32■■□□□ 1.16
PTPN4-207ENST00000460162 ZNF189O75820 626 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-207ENST00000460162 STK10O94804 968 aaKnown RBP22.32■■□□□ 1.16
PTPN4-207ENST00000460162 LPOP22079 712 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-207ENST00000460162 CTNNA2P26232 953 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 AKT1P31749 480 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 SEPHS1P49903 392 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 POLE2P56282 527 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 CDC20Q12834 499 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 TAF1AQ15573 450 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-207ENST00000460162 CRTC2Q53ET0 693 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-207ENST00000460162 KLHL35Q6PF15 583 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 GPR150Q8NGU9 434 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 KLHL6Q8WZ60 621 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 PPP1R2P1Q96PQ5 205 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 OSBPL8Q9BZF1 889 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 ARL5AQ9Y689 179 aa22.32■■□□□ 1.16
PTPN4-207ENST00000460162 EPN1Q9Y6I3 576 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-207ENST00000460162 SOWAHDA6NJG2 315 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 C2orf81A6NN90 581 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 BTNL10A8MVZ5 291 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 AGTP01019 485 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 MSH3P20585 1137 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 CA5AP35218 305 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 ADRA1AP35348 466 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 CCR10P46092 362 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 SH3BP2P78314 561 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 MC1RQ01726 317 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 NFE2L1Q14494 772 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 RPE65Q16518 533 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 CACHD1Q5VU97 1274 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 IRGCQ6NXR0 463 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 TMEM220Q6QAJ8 160 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 RANBP10Q6VN20 620 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 FAM83HQ6ZRV2 1179 aaPredicted RBP22.31■■□□□ 1.16
PTPN4-207ENST00000460162 UNC5BQ8IZJ1 945 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 ZNF398Q8TD17 642 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 STARD8Q92502 1023 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 MRFAP1L1Q96HT8 127 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 OR6C1Q96RD1 312 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 C10orf88Q9H8K7 445 aa22.31■■□□□ 1.16
PTPN4-207ENST00000460162 RCCD1A6NED2 376 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 GOLGA6L3A6NEY3 463 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 C5orf60A6NFR6 353 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 KIF1CO43896 1103 aaKnown RBP22.3■■□□□ 1.16
PTPN4-207ENST00000460162 RBP3P10745 1247 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 PSMB4P28070 264 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 CETN2P41208 172 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 RWDD2BP57060 319 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 EIF3EP60228 445 aaKnown RBP22.3■■□□□ 1.16
PTPN4-207ENST00000460162 PDE1BQ01064 536 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 KCNAB2Q13303 367 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 PRPSAP1Q14558 356 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 ANKRD20A2Q5SQ80 823 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 FNBP1LQ5T0N5 605 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 ANKRD20A1Q5TYW2 823 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 ANKRD20A3Q5VUR7 823 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 ATG14Q6ZNE5 492 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 FAM92BQ6ZTR7 304 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 TMTC1Q8IUR5 882 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 UBXN4Q92575 508 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms