RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PRR19A6NJB7 356 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 SDR42E2A6NKP2 422 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 PFDN6O15212 129 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 EML2O95834 649 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 GOT2P00505 430 aaKnown RBP15.86■□□□□ 0.13
CD28-203ENST00000458610 PAMP19021 973 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 MGAT1P26572 445 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 RPL10P27635 214 aaKnown RBP15.86■□□□□ 0.13
CD28-203ENST00000458610 CCKBRP32239 447 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 CA5AP35218 305 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 LSSP48449 732 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 PRLHRP49683 370 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 ARSDP51689 593 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 CYP4F3Q08477 520 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 PPIL6Q8IXY8 311 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 WDR36Q8NI36 951 aaKnown RBP15.86■□□□□ 0.13
CD28-203ENST00000458610 HM13Q8TCT9 377 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 ZCCHC14Q8WYQ9 949 aaKnown RBP15.86■□□□□ 0.13
CD28-203ENST00000458610 CPT1BQ92523 772 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 KIFC1Q9BW19 673 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 TSSK1BQ9BXA7 367 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 DDX47Q9H0S4 455 aaKnown RBP15.86■□□□□ 0.13
CD28-203ENST00000458610 POLR1BQ9H9Y6 1135 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 ASIC3Q9UHC3 531 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 ENTPD2Q9Y5L3 495 aa15.86■□□□□ 0.13
CD28-203ENST00000458610 IGHV1OR21-1A0A087WYE8 117 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 NDC80O14777 642 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 DUX1O43812 170 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 OR56A5P0C7T3 313 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 CD1CP29017 333 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 RBMS1P29558 406 aaKnown RBP15.85■□□□□ 0.13
CD28-203ENST00000458610 PBLDP30039 288 aaPredicted RBP15.85■□□□□ 0.13
CD28-203ENST00000458610 FOXN2P32314 431 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 MLLT3P42568 568 aaPredicted RBP15.85■□□□□ 0.13
CD28-203ENST00000458610 TTPAP49638 278 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 CDKN1CP49918 316 aaPredicted RBP15.85■□□□□ 0.13
CD28-203ENST00000458610 TERF1P54274 439 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 SEPT7Q16181 437 aaKnown RBP15.85■□□□□ 0.13
CD28-203ENST00000458610 DBN1Q16643 649 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 CASC4Q6P4E1 433 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 PACS1Q6VY07 963 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 USP53Q70EK8 1073 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 SDCCAG8Q86SQ7 713 aaPredicted RBP15.85■□□□□ 0.13
CD28-203ENST00000458610 KLHL7Q8IXQ5 586 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 CFAP206Q8IYR0 622 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 MPP5Q8N3R9 675 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 ZFPM2Q8WW38 1151 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 ATXN7L3BQ96GX2 97 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 LIN37Q96GY3 246 aaPredicted RBP15.85■□□□□ 0.13
CD28-203ENST00000458610 ZMYND15Q9H091 742 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 SLC2A6Q9UGQ3 507 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 SOX13Q9UN79 622 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 PCDHB1Q9Y5F3 818 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 PTPRBP23467 1997 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 SCN8AQ9UQD0 1980 aa15.85■□□□□ 0.13
CD28-203ENST00000458610 ASXL3Q9C0F0 2248 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 TCRBV7S3A2A0A539 114 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 LILRA5A6NI73 299 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 SMAPO00193 183 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 FTH1P02794 183 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 SLC35G4P0C7Q5 338 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 SLC19A1P41440 591 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 DRG2P55039 364 aaKnown RBP15.84■□□□□ 0.13
CD28-203ENST00000458610 UBE2IP63279 158 aaKnown RBP15.84■□□□□ 0.13
CD28-203ENST00000458610 DR1Q01658 176 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 PLOD1Q02809 727 aaPredicted RBP15.84■□□□□ 0.13
CD28-203ENST00000458610 ZFP36L1Q07352 338 aaKnown RBP15.84■□□□□ 0.13
CD28-203ENST00000458610 RPA4Q13156 261 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 TRA2AQ13595 282 aaKnown RBP eCLIP15.84■□□□□ 0.13
CD28-203ENST00000458610 PTK6Q13882 451 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 NFE2L1Q14494 772 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 ST3GAL2Q16842 350 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 TMEM71Q6P5X7 295 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 TMEM26Q6ZUK4 368 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 PIANPQ8IYJ0 282 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 OR4D9Q8NGE8 314 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 ZNF778Q96MU6 729 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 CMKLR1Q99788 373 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 EPB41L5Q9HCM4 733 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 TREX1Q9NSU2 369 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 CATSPERZQ9NTU4 200 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 SCHIP1Q9P0W5 487 aaPredicted RBP15.84■□□□□ 0.13
CD28-203ENST00000458610 ZNF624Q9P2J8 865 aaPredicted RBP15.84■□□□□ 0.13
CD28-203ENST00000458610 ATXN7L1Q9ULK2 861 aaPredicted RBP15.84■□□□□ 0.13
CD28-203ENST00000458610 PCDHGA8Q9Y5G5 932 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 HEBP2Q9Y5Z4 205 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 COLEC10Q9Y6Z7 277 aa15.84■□□□□ 0.13
CD28-203ENST00000458610 ARHGEF17Q96PE2 2063 aaPredicted RBP15.83■□□□□ 0.13
CD28-203ENST00000458610 OR51F1A6NGY5 319 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 IFRD1O00458 451 aaPredicted RBP15.83■□□□□ 0.12
CD28-203ENST00000458610 CD3EAPO15446 510 aaKnown RBP15.83■□□□□ 0.12
CD28-203ENST00000458610 POLBP06746 335 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 BRAFP15056 766 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 AMD1P17707 334 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 NDUFS1P28331 727 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 GABREP78334 506 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 CRADDP78560 199 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 DHX34Q14147 1143 aaKnown RBP15.83■□□□□ 0.12
CD28-203ENST00000458610 KRT33BQ14525 404 aa15.83■□□□□ 0.12
CD28-203ENST00000458610 PHF19Q5T6S3 580 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms