RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SEPHS1P49903 392 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 ITGA9Q13797 1035 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 CHRNA6Q15825 494 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 LDLRAP1Q5SW96 308 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 CLEC18BQ6UXF7 455 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 BBS12Q6ZW61 710 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 CLEC18CQ8NCF0 446 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 RNF31Q96EP0 1072 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 ZPBPQ9BS86 351 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 C10orf88Q9H8K7 445 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 UCK1Q9HA47 277 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 LRRC4CQ9HCJ2 640 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 APMAPQ9HDC9 416 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 IL26Q9NPH9 171 aa15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHCHD3-204ENST00000457942 NOTCH2Q04721 2471 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 OR2AG2A6NM03 316 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 ZNF891A8MT65 544 aaPredicted RBP15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 STX7O15400 261 aaKnown RBP15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 CAPN5O15484 640 aaPredicted RBP15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 NKX2-8O15522 239 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 GPR39O43194 453 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UGT1A9O60656 530 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 STK17BO94768 372 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 LCA5LO95447 670 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 PTMAP06454 111 aaKnown RBP15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UGT1A6P19224 532 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 NR1D1P20393 614 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 MSH3P20585 1137 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UGT1A1P22309 533 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UGT1A4P22310 534 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 RBL1P28749 1068 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 CETN2P41208 172 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 GEMP55040 296 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 ATP1A1-AS1Q5TC04 95 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 IRGCQ6NXR0 463 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 AMZ2Q86W34 360 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 CDKL3Q8IVW4 592 aaPredicted RBP15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UNC5BQ8IZJ1 945 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 RSC1A1Q92681 617 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 C9orf72Q96LT7 481 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 PSMG3-AS1Q96PY0 264 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 GBA3Q9H227 469 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UGT1A7Q9HAW7 530 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UGT1A10Q9HAW8 530 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 UGT1A8Q9HAW9 530 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 FBXO8Q9NRD0 319 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 IL17CQ9P0M4 197 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 ANAPC2Q9UJX6 822 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 PILRAQ9UKJ1 303 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 TMPRSS11EQ9UL52 423 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 SLC30A1Q9Y6M5 507 aa15.46■□□□□ 0.07
CHCHD3-204ENST00000457942 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 ANXA9O76027 345 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 ANKRD34CP0C6C1 535 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 BRAFP15056 766 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 MAP4P27816 1152 aaKnown RBP15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 CAPZBP47756 277 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 LEPRP48357 1165 aaKnown RBP15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 OTUD4Q01804 1114 aaKnown RBP15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 XRCC4Q13426 336 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 GPR18Q14330 331 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 PRPSAP1Q14558 356 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 PLCL1Q15111 1095 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 GPRC6AQ5T6X5 926 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 AGAP9Q5VTM2 703 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 TMEM220Q6QAJ8 160 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 ABRAXAS1Q6UWZ7 409 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 FAM92BQ6ZTR7 304 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 DET1Q7L5Y6 550 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 RBM12BQ8IXT5 1001 aaKnown RBP15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 ACTL9Q8TC94 416 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 EFHD1Q9BUP0 239 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 OGFRQ9NZT2 677 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 FAM8A1Q9UBU6 413 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 PSMD13Q9UNM6 376 aa15.45■□□□□ 0.06
CHCHD3-204ENST00000457942 C2orf81A6NN90 581 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 KCNN4O15554 427 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 KCNJ13O60928 360 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 POP7O75817 140 aaKnown RBP15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 NDUFA10O95299 355 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 PRAMEF1O95521 474 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 AGTP01019 485 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 C9P02748 559 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 PSMB4P28070 264 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 CTNNA1P35221 906 aaKnown RBP15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 CTSCP53634 463 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 EIF3EP60228 445 aaKnown RBP15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 COPS2P61201 443 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 LONRF2Q1L5Z9 754 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 DEFB109BQ30KR1 87 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 FNBP1LQ5T0N5 605 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 CACHD1Q5VU97 1274 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 DARS2Q6PI48 645 aaKnown RBP15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 WASH2PQ6VEQ5 465 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 C11orf96Q7Z7L8 435 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 RASGRP3Q8IV61 690 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 RASGEF1AQ8N9B8 481 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 DDHD1Q8NEL9 900 aa15.44■□□□□ 0.06
CHCHD3-204ENST00000457942 LRRC45Q96CN5 670 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms