RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 KLHL35Q6PF15 583 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 GCNT7Q6ZNI0 430 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 SH2D5Q6ZV89 423 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 NPY6RQ99463 290 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 C1QTNF7Q9BXJ2 289 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 C6orf62Q9GZU0 229 aaPredicted RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 HPS4Q9NQG7 708 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 ABCB8Q9NUT2 735 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 SCHIP1Q9P0W5 487 aaPredicted RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 LAMB2P55268 1798 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 CD3EAPO15446 510 aaKnown RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 SEC13P55735 322 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TRAP1Q12931 704 aaKnown RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 HEATR4Q86WZ0 1026 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TRAPPC5Q8IUR0 188 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 HAPLN3Q96S86 360 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 SLC39A8Q9C0K1 460 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 INVSQ9Y283 1065 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3DA0A087WVF3 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3IA0A087WXS9 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3EA0A087X179 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3KA0A087X1G2 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 ZCWPW2A0A1B0GU75 182 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3FA6NER0 549 aaPredicted RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3LB9A6J9 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 BEST1O76090 585 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 RB1P06400 928 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3HP0C7X1 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 MAGEA6P43360 314 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 MAGEA11P43364 429 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 CAP1Q01518 475 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 CARTPTQ16568 116 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3GQ6DHY5 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3CQ6IPX1 549 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TBC1D3Q8IZP1 549 aaPredicted RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 TRMT61BQ9BVS5 477 aaKnown RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 CHID1Q9BWS9 393 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 PALMDQ9NP74 551 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 AASDHPPTQ9NRN7 309 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 EBF1Q9UH73 591 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 SCML2Q9UQR0 700 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TLR6Q9Y2C9 796 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 TRIOBPQ9H2D6 2365 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 VPS4BO75351 444 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 KCNH1O95259 989 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 HSF5Q4G112 596 aaPredicted RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 RABL3Q5HYI8 236 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 ZCCHC2Q9C0B9 1178 aaKnown RBP16.15■□□□□ 0.18
LSS-205ENST00000457828 ASB8Q9H765 288 aa16.15■□□□□ 0.18
LSS-205ENST00000457828 SEC22BO75396 215 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 CDK4P11802 303 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 CYP4B1P13584 511 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 ALDH4A1P30038 563 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 CAPGP40121 348 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 CRTC3Q6UUV7 619 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 ROPN1LQ96C74 230 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 ARPC2O15144 300 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 RHOP08100 348 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 HSMCR30P0CW71 290 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 CCNCP24863 283 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 PIK3CGP48736 1102 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 OGFOD2Q6N063 350 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 ERMP1Q7Z2K6 904 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 LILRA2Q8N149 483 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 TMEM159Q96B96 161 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 ISOC1Q96CN7 298 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 GPATCH1Q9BRR8 931 aaKnown RBP16.14■□□□□ 0.17
LSS-205ENST00000457828 PARVBQ9HBI1 364 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 MTMR10Q9NXD2 777 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 TBC1D19Q8N5T2 526 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 KBTBD7Q8WVZ9 684 aa16.14■□□□□ 0.17
LSS-205ENST00000457828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.13■□□□□ 0.17
LSS-205ENST00000457828 H3BNH8 94 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 ZNF182P17025 639 aaPredicted RBP16.13■□□□□ 0.17
LSS-205ENST00000457828 MAGP20916 626 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 NDST2P52849 883 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 TSTD2Q5T7W7 516 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 FBXL22Q6P050 247 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 CMTM8Q8IZV2 173 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 NPWQ8N729 165 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 RTL3Q8N8U3 475 aaKnown RBP16.13■□□□□ 0.17
LSS-205ENST00000457828 BPIFB1Q8TDL5 484 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 PSMG2Q969U7 264 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 MTFMTQ96DP5 389 aaKnown RBP16.13■□□□□ 0.17
LSS-205ENST00000457828 HMCESQ96FZ2 354 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 KCNA7Q96RP8 456 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 MAGEH1Q9H213 219 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 ABCB10Q9NRK6 738 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 PTGDR2Q9Y5Y4 395 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 PHIPQ8WWQ0 1821 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 FAM20BO75063 409 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 HLA-DQB2P05538 268 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 GPIP06744 558 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 SLC5A2P31639 672 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 IL2P60568 153 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 RPL38P63173 70 aaKnown RBP16.13■□□□□ 0.17
LSS-205ENST00000457828 RAET1GQ6H3X3 334 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 KIAA0408Q6ZU52 694 aa16.13■□□□□ 0.17
LSS-205ENST00000457828 GPRIN3Q6ZVF9 776 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms