RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 LIPMQ5VYY2 423 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CCSAPQ6IQ19 270 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 KDELC1Q6UW63 502 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PHACTR4Q8IZ21 702 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SIX6OS1Q8N1H7 587 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PROX1Q92786 737 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 MS4A3Q96HJ5 214 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TTPALQ9BTX7 342 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 GALPQ9UBC7 116 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 GPR45Q9Y5Y3 372 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 KRT87PA6NCN2 255 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 UPK1BO75841 260 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 MICAL2O94851 1124 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CHRNA1P02708 482 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SNRPB2P08579 225 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 KRT7P08729 469 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TSHRP16473 764 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 GADD45AP24522 165 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 IFNA8P32881 189 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 NAMPTP43490 491 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 NUDT6P53370 316 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TGFB2P61812 414 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ESRRGP62508 458 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 MTMR1Q13613 665 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 DPYSQ14117 519 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 POU6F1Q14863 301 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PTGR1Q14914 329 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 KIAA0040Q15053 153 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 PON2Q15165 354 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 DUSP7Q16829 419 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC10A6Q3KNW5 377 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TOR2AQ5JU69 321 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CYP2U1Q7Z449 544 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 GALNT5Q7Z7M9 940 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 APPL2Q8NEU8 664 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 OR52B6Q8NGF0 335 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 FBLIM1Q8WUP2 373 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 LRRC39Q96DD0 335 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CNDP2Q96KP4 475 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 OR5M11Q96RB7 305 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CNPY3Q9BT09 278 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 NIFKQ9BYG3 293 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 DEFB129Q9H1M3 183 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ADNPQ9H2P0 1102 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ACOT13Q9NPJ3 140 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 TOR4AQ9NXH8 423 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 CPA4Q9UI42 421 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 ARHGAP21Q5T5U3 1957 aa4.49□□□□□ -1.69
DEPDC1-202ENST00000456315 OR1I1O60431 355 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 SEMA7AO75326 666 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 SMPD1P17405 629 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 HOXA7P31268 230 aaPredicted RBP4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 AGFG1P52594 562 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 ZMYND11Q15326 602 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 TUSC1Q2TAM9 212 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 USP39Q53GS9 565 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 UNC50Q53HI1 259 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 TOR1AIP1Q5JTV8 583 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 SYT6Q5T7P8 510 aaPredicted RBP4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 VSIG10LQ86VR7 867 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 P2RY8Q86VZ1 359 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 GALNT12Q8IXK2 581 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 COLGALT2Q8IYK4 626 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 ANKRD52Q8NB46 1076 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 PIK3C3Q8NEB9 887 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC35F5Q8WV83 523 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 HTR3CQ8WXA8 447 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC7A6Q92536 515 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF560Q96MR9 790 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 NODALQ96S42 347 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 KCTD15Q96SI1 283 aaPredicted RBP4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 RTP3Q9BQQ7 232 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM39BQ9GZU3 492 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 ZDHHC4Q9NPG8 344 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 IARS2Q9NSE4 1012 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 IGSF5Q9NSI5 407 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 MORF4L1Q9UBU8 362 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 TSPAN16Q9UKR8 245 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 PKP3Q9Y446 797 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 CLRN2A0PK11 232 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 C2orf78A6NCI8 922 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 LRRIQ4A6NIV6 560 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 TULP3O75386 442 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 PTPN6P29350 595 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 HTR2BP41595 481 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 AGTR2P50052 363 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 CDKN2DP55273 166 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 LIPEQ05469 1076 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 VAC14Q08AM6 782 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 ARHGEF6Q15052 776 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 ZCCHC8Q6NZY4 707 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 PAQR9Q6ZVX9 377 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 CPA6Q8N4T0 437 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 MED30Q96HR3 178 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 RADILQ96JH8 1075 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 C12orf42Q96LP6 360 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 C1orf50Q9BV19 199 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 PARVBQ9HBI1 364 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 ATP13A2Q9NQ11 1180 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 TMLHEQ9NVH6 421 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms