RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-202ENST00000455220 DGKBQ9Y6T7 804 aa16.34■□□□□ 0.21
CCDC90B-202ENST00000455220 ATXN2Q99700 1313 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-202ENST00000455220 GOLGA6L10A6NI86 522 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 RGS16O15492 202 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 GRID2O43424 1007 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 VPS26AO75436 327 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 RFPL1O75677 317 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 WISP3O95389 354 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 GNSP15586 552 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 STMN1P16949 149 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 CHRM3P20309 590 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 NXPH1P58417 271 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 RAB10P61026 200 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 EIF2B5Q13144 721 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 ALG11Q2TAA5 492 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 PYCR3Q53H96 274 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 LAYNQ6UX15 382 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 SPATS2Q86XZ4 545 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 SYT12Q8IV01 421 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 GIMAP7Q8NHV1 300 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 CD200R1Q8TD46 325 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 GPR21Q99679 349 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 CCM2Q9BSQ5 444 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 SNX15Q9NRS6 342 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 SPATS2LQ9NUQ6 558 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 GALPQ9UBC7 116 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 GULP1Q9UBP9 304 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 MYO15AQ9UKN7 3530 aa16.33■□□□□ 0.2
CCDC90B-202ENST00000455220 PI4KAP42356 2102 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 C17orf113A0A1B0GUU1 675 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 KLHL33A6NCF5 533 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 E5RI56 91 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 TPP1O14773 563 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 KMOO15229 486 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 TRIM16O95361 564 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 KRT15P19012 456 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 AOAHP28039 575 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 CCR7P32248 378 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 SKIV2L2P42285 1042 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 CSNK1EP49674 416 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 SLC12A2P55011 1212 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 SRP54P61011 504 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 TCF15Q12870 199 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 UGT3A1Q6NUS8 523 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 CRTC3Q6UUV7 619 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 PRR23BQ6ZRT6 265 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 TRABD2AQ86V40 505 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 PIM3Q86V86 326 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 PARGQ86W56 976 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 GALNT13Q8IUC8 556 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 PRSS33Q8NF86 280 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 SKA1Q96BD8 255 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 ZBTB9Q96C00 473 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 LOXL4Q96JB6 756 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 CARS2Q9HA77 564 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 CYP4F12Q9HCS2 524 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 DHRS7Q9Y394 339 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 R4GN57 208 aa16.32■□□□□ 0.2
CCDC90B-202ENST00000455220 OPA1O60313 960 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 POP7O75817 140 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 MT-ND3P03897 115 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 ITGB6P18564 788 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 SAT1P21673 171 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 CRABP2P29373 138 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 TYK2P29597 1187 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 PGGT1BP53609 377 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 GBX1Q14549 363 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 TEAD4Q15561 434 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 XKR5Q6UX68 686 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 SH2D5Q6ZV89 423 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 CCDC91Q7Z6B0 441 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 OR2L2Q8NH16 312 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 ACMSDQ8TDX5 336 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 PIGKQ92643 395 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 TSACCQ96A04 125 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 FAM136AQ96C01 138 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 OR2M4Q96R27 311 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 SLC30A3Q99726 388 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 TIMM29Q9BSF4 260 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 ZNHIT2Q9UHR6 403 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 TRMT6Q9UJA5 497 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 PRKAB1Q9Y478 270 aa16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 TP53BP1Q12888 1972 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-202ENST00000455220 A0A1W2PPM1 405 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 MGAT4DA6NG13 374 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 PRR19A6NJB7 356 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 FOXO6A8MYZ6 492 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 KPNA5O15131 536 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 PHGDHO43175 533 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 EPN2O95208 641 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 RASGRP1O95267 797 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 C2P06681 752 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 SLC35E2BP0CK96 405 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 ZNF37AP17032 561 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 ATP5DP30049 168 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 GNPDA1P46926 289 aa16.3■□□□□ 0.2
CCDC90B-202ENST00000455220 HK3P52790 923 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms