RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TBX10O75333 385 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 WFS1O76024 890 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ESRRBO95718 433 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 OTCP00480 354 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 UROSP10746 265 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 THRAP10827 490 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CYP2A7P20853 494 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SERPINB3P29508 390 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 NTSR1P30989 418 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ABCG1P45844 678 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SLC6A11P48066 632 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ACADVLP49748 655 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 NCALDP61601 193 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 IRX4P78413 519 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 OVGP1Q12889 678 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TGFBIQ15582 683 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 UNC50Q53HI1 259 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CES4AQ5XG92 561 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 OGFOD2Q6N063 350 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 FRA10AC1Q70Z53 315 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 LRRC70Q7Z2Q7 622 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SPATA19Q7Z5L4 167 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 LDB1Q86U70 411 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TSPAN33Q86UF1 283 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TMPRSS6Q8IU80 811 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ZNF781Q8N8C0 355 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 PTGR2Q8N8N7 351 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CXorf40AQ8TE69 158 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 KLHL29Q96CT2 875 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 AP2M1Q96CW1 435 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 NUS1Q96E22 293 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 PTCD3Q96EY7 689 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CCM2Q9BSQ5 444 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CCDC106Q9BWC9 280 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SLC29A3Q9BZD2 475 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 C20orf27Q9GZN8 174 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 DPEP2Q9H4A9 486 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 PARVBQ9HBI1 364 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TRIM39Q9HCM9 518 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SLC2A4RGQ9NR83 387 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TRAF6Q9Y4K3 522 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GRXCR2A6NFK2 248 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SUPT3HB4E1H0 165 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 NPIPB8E9PQR5 432 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 MYO1CO00159 1063 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 IFRD1O00458 451 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 KPNA3O00505 521 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 MAN2B1O00754 1011 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 LINC01565O15544 149 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GRID2O43424 1007 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 OR1I1O60431 355 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SUPT3HO75486 399 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GPC4O75487 556 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TOP3BO95985 862 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ANXA5P08758 320 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 HIST1H2AGP0C0S8 130 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ESRRAP11474 423 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ACPPP15309 386 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 HIST1H2ADP20671 130 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GKP32189 559 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 LTBRP36941 435 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 HSD17B2P37059 387 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 KIR2DL1P43626 348 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CLCQ05315 142 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GRSF1Q12849 480 aaKnown RBP eCLIP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GTF2H3Q13889 308 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ZNF460Q14592 562 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ACOX1Q15067 660 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 OR4D1Q15615 310 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GSTA3Q16772 222 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 PPP1R3AQ16821 1122 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TTC31Q49AM3 519 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GGTA1PQ4G0N0 100 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 COQ5Q5HYK3 327 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 TMEM196Q5HYL7 178 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 HABP4Q5JVS0 413 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 EOGTQ5NDL2 527 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 KANK2Q63ZY3 851 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 PARM1Q6UWI2 310 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 SBSNQ6UWP8 590 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CYHR1Q6ZMK1 362 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ZCCHC23Q6ZST2 131 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 HSD11B1LQ7Z5J1 315 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CUZD1Q86UP6 607 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 PIM3Q86V86 326 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CCNYL1Q8N7R7 359 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 DENND6BQ8NEG7 585 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 RP9Q8TA86 221 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 MAGEC3Q8TD91 643 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 MCOLN3Q8TDD5 553 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 EEF1AKMT1Q8WVE0 214 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 ASB11Q8WXH4 323 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 HIST1H2AHQ96KK5 128 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 FOPNLQ96NB1 174 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 GAS2L1Q99501 681 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 HIST1H2AJQ99878 128 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 BTBD10Q9BSF8 475 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 H2AFJQ9BTM1 129 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 NTMT1Q9BV86 223 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms