RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 WASH2PQ6VEQ5 465 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 RAB44Q7Z6P3 723 aaPredicted RBP27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 LDB1Q86U70 411 aaPredicted RBP27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 CTAGE6Q86UF2 777 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 IGDCC3Q8IVU1 814 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 CTAGE4Q8IX94 777 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 SFRP1Q8N474 314 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 GPR150Q8NGU9 434 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 OR2L2Q8NH16 312 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 WASH6PQ9NQA3 447 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 FAM169AQ9Y6X4 670 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 C17orf113A0A1B0GUU1 675 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 GOLGA8KD6RF30 607 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 GOLGA8TH3BQL2 631 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 NUDT21O43809 227 aaKnown RBP27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 OR1I1O60431 355 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 POLBP06746 335 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 PGAM1P18669 254 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 IDSP22304 550 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 METRNLQ641Q3 311 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 ABRAXAS1Q6UWZ7 409 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 DHRS13Q6UX07 377 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 XKR5Q6UX68 686 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 FAM83HQ6ZRV2 1179 aaPredicted RBP27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 LRRC39Q96DD0 335 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 LRIT1Q9P2V4 623 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 TEX264Q9Y6I9 313 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 RNF215Q9Y6U7 377 aa27.49■■□□□ 1.99
SMARCC1-203ENST00000454240 OR5K4A6NMS3 321 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 E7ESA3 106 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 QSOX1O00391 747 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 SLC2A4P14672 509 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 PNLIPP16233 465 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 PBLDP30039 288 aaPredicted RBP27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 NFE2L1Q14494 772 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 AGAP9Q5VTM2 703 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 MRNIPQ6NTE8 343 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 CCNJLQ8IV13 435 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 NOA1Q8NC60 698 aaKnown RBP27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 SLC37A2Q8TED4 501 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 CCDC74AQ96AQ1 378 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 WDR83Q9BRX9 315 aaKnown RBP27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 CCM2Q9BSQ5 444 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 RABGEF1Q9UJ41 708 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 WASF3Q9UPY6 502 aa27.48■■□□□ 1.99
SMARCC1-203ENST00000454240 TRBV23OR9-2A0A075B6M9 112 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 KIR2DS5A0A0G2JLQ3 304 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 A0A0G2JNG1 304 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 MED19A0JLT2 244 aaPredicted RBP27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 KIR2DS3K7RE56 304 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 TTC4O95801 387 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 BRAFP15056 766 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 PMLP29590 882 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 ELK3P41970 407 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 FASLGP48023 281 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 SLC7A5Q01650 507 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 KIR2DS5Q14953 304 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 TRADDQ15628 312 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 LONRF1Q17RB8 773 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 TYSND1Q2T9J0 566 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 ZNF658BQ4V348 819 aaPredicted RBP27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 NEPROQ6NW34 567 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 SDCCAG8Q86SQ7 713 aaPredicted RBP27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 CHCHD4Q8N4Q1 142 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 CEP112Q8N8E3 955 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.47■■□□□ 1.992e-8■■■■□ 24.5
SMARCC1-203ENST00000454240 MAPK15Q8TD08 544 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 SEC14L1Q92503 715 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 ART4Q93070 314 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 CCDC3Q9BQI4 270 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 VPS37BQ9H9H4 285 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 IL1RAPL1Q9NZN1 696 aa27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 SCHIP1Q9P0W5 487 aaPredicted RBP27.47■■□□□ 1.99
SMARCC1-203ENST00000454240 PPM1DO15297 605 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 GSTM1P09488 218 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 OGNP20774 298 aaKnown RBP27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 RPL10P27635 214 aaKnown RBP27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 GSTM4Q03013 218 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 FOXC1Q12948 553 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 CRYMQ14894 314 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 NR1D2Q14995 579 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 SMAD1Q15797 465 aaKnown RBP27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 SEPT7Q16181 437 aaKnown RBP27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 SPANXN3Q5MJ09 141 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 ZNF438Q7Z4V0 828 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 HM13Q8TCT9 377 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 TCF12Q99081 682 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 ACSL5Q9ULC5 683 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 WDR37Q9Y2I8 494 aa27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 COL27A1Q8IZC6 1860 aaPredicted RBP27.46■■□□□ 1.99
SMARCC1-203ENST00000454240 PDZK1P1A8MUH7 402 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 BHMG1C9JSJ3 638 aaPredicted RBP27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 OPA1O60313 960 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 NDUFS3O75489 264 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 OR56A5P0C7T3 313 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 INSM1Q01101 510 aaPredicted RBP27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 CAV1Q03135 178 aa27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 HP1BP3Q5SSJ5 553 aaPredicted RBP27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 CHCHD2P9Q5T1J5 151 aaPredicted RBP27.45■■□□□ 1.98
SMARCC1-203ENST00000454240 CILP2Q8IUL8 1156 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms