RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SPRY4Q9C004 299 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 FBXO8Q9NRD0 319 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 SIDT1Q9NXL6 827 aaKnown RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 KLHL3Q9UH77 587 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 PILRAQ9UKJ1 303 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 PACSIN2Q9UNF0 486 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 KCTD3Q9Y597 815 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 C5orf60A6NFR6 353 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 OR2AG2A6NM03 316 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 AGAP14A8MT82 685 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 MIF4GDA9UHW6 222 aaKnown RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 DDX3YO15523 660 aaKnown RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 KCNJ13O60928 360 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 POP7O75817 140 aaKnown RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 SRP72O76094 671 aaKnown RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 STK10O94804 968 aaKnown RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 FTCDO95954 541 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 ITGB2P05107 769 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 TYRP1P17643 537 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 CDC25BP30305 580 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 CETN2P41208 172 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 CAPZBP47756 277 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 ZNF140P52738 457 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 XIAPP98170 497 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 GPR18Q14330 331 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 LINC00303Q3SY05 128 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 KCTD11Q693B1 232 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 XKR5Q6UX68 686 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 RBM12BQ8IXT5 1001 aaKnown RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 GPR150Q8NGU9 434 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 ZNF398Q8TD17 642 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 RSC1A1Q92681 617 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 C9orf72Q96LT7 481 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 PPP1R2P1Q96PQ5 205 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 CTRCQ99895 268 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 ARNT2Q9HBZ2 717 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 APMAPQ9HDC9 416 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 IMPACTQ9P2X3 320 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 FKBPLQ9UIM3 349 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 AMFRQ9UKV5 643 aa12.24□□□□□ -0.45
CPSF4-208ENST00000452047 DNMT3AQ9Y6K1 912 aaPredicted RBP12.24□□□□□ -0.45
CPSF4-208ENST00000452047 C2orf81A6NN90 581 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 TOX3O15405 576 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-208ENST00000452047 SGTAO43765 313 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 RAD1O60671 282 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 ZNF189O75820 626 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-208ENST00000452047 HALP42357 657 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 LEPRP48357 1165 aaKnown RBP12.23□□□□□ -0.45
CPSF4-208ENST00000452047 ATP1A2P50993 1020 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 KIF5AQ12840 1032 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 NFE2L1Q14494 772 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 PRPSAP1Q14558 356 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 LONRF2Q1L5Z9 754 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 TMEM220Q6QAJ8 160 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 CEACAM20Q6UY09 585 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 SYCE1Q8N0S2 351 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 UBL4BQ8N7F7 174 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 BEND7Q8N7W2 519 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-208ENST00000452047 OR13C4Q8NGS5 318 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 CXorf40BQ96DE9 158 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 MED8Q96G25 268 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 HES6Q96HZ4 224 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 ZNF514Q96K75 400 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-208ENST00000452047 TGM7Q96PF1 710 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 C19orf43Q9BQ61 176 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 TBL1YQ9BQ87 522 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 ZPBPQ9BS86 351 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 R3HDM2Q9Y2K5 976 aaKnown RBP12.23□□□□□ -0.45
CPSF4-208ENST00000452047 TMEM184BQ9Y519 407 aaPredicted RBP12.23□□□□□ -0.45
CPSF4-208ENST00000452047 CAPN6Q9Y6Q1 641 aa12.23□□□□□ -0.45
CPSF4-208ENST00000452047 TCRBV7S2A1N4TA0A589 114 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 CAPN5O15484 640 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-208ENST00000452047 LDB2O43679 373 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 METTL18O95568 372 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 CRTAMO95727 393 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 LIFP15018 202 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 AMD1P17707 334 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 MSH3P20585 1137 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 AKT1P31749 480 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 GDF10P55107 478 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 CYP4F2P78329 520 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 PDE1BQ01064 536 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 SPARCL1Q14515 664 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 RPE65Q16518 533 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 BCL7AQ4VC05 210 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 FNBP1LQ5T0N5 605 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 METRNLQ641Q3 311 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 DET1Q7L5Y6 550 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 TIPARPQ7Z3E1 657 aaKnown RBP12.22□□□□□ -0.45
CPSF4-208ENST00000452047 PRSS42Q7Z5A4 293 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 CACNA2D3Q8IZS8 1091 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 TXLNBQ8N3L3 684 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 IL22RA1Q8N6P7 574 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 FAM71DQ8N9W8 422 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 ZSCAN1Q8NBB4 408 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 TTC13Q8NBP0 860 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 SLC35B2Q8TB61 432 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 NAT14Q8WUY8 206 aa12.22□□□□□ -0.45
CPSF4-208ENST00000452047 EXTL1Q92935 676 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms